Rubrobacter tropicus: GBA63_09655
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Entry
GBA63_09655 CDS
T06510
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rub
Rubrobacter tropicus
Pathway
rub00750
Vitamin B6 metabolism
rub01100
Metabolic pathways
rub01240
Biosynthesis of cofactors
Module
rub_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GBA63_09655 (pdxS)
Enzymes [BR:
rub01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GBA63_09655 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
FMN_dh
His_biosynth
NMO
TMP-TENI
IGPS
NanE
OMPdecase
Glu_synthase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
QIN82881
UniProt:
A0A6G8Q8T3
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All DBs
Position
1971516..1972412
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AA seq
298 aa
AA seq
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MSENGRLTGTFRVKSGMAQMLKGGVIMDVVDAEQARIAEESGAVAVMALERVPADIRADG
GVARMSDPEMISGIQEAVSIPVMAKARIGHFVEAQVLEALEVDYIDESEVLTPADEKHHI
DKAAFEVPFVCGATNLGEALRRIGEGAAMIRSKGEAGTGNVVEAVRHMRSIVGGIRRLGV
LEEDELMSEAKELQAPYELVRWVAENGRLPVVLFTAGGIATPSDAALMMQLGADGVFVGS
GIFKSGDPATRARAIVKATTHFKDAKVVAEASRGLGEAMVGREMGSLKDEERLATRGW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaacgggcggttaaccgggacgttcagggtcaagagcgggatggcccagatg
ctcaaaggcggcgtgatcatggacgtcgtcgacgccgaacaggcgcgcatcgccgaggag
tcgggcgccgtcgccgtgatggcgctcgagcgtgtacccgccgatatcagggcggacggg
ggggtcgccaggatgagcgaccccgagatgatctccggcatccaggaagcggtctcgatc
cccgtgatggcgaaggcgcgtataggccacttcgtcgaggcccaggtgctcgaagcgctc
gaggtcgactacatcgacgagtctgaagttttgacgccggccgacgagaaacatcacata
gacaaggccgccttcgaggtgccctttgtttgcggtgctacgaacctcggggaggctttg
cggcgcatcggcgagggtgcggccatgatccggtcgaagggcgaggcgggcacgggcaac
gtggtcgaggccgtccgccacatgcggtccatcgtcggcggcatccgtcgcctgggcgtg
ctggaagaagacgagctcatgagcgaggcgaaggagttgcaggccccttacgagctggtt
cggtgggtcgcggagaacggccggttgccggtcgtgctattcacggcgggcgggatcgcg
acgccctcggacgcggcgttgatgatgcagctcggggccgacggggtgttcgtggggagc
ggtatcttcaagagcggggacccggccacgcgggcgcgggccatcgtgaaggcgacgacg
cacttcaaggacgcgaaggtcgtggccgaggcgagccggggcctgggcgaggccatggtc
ggccgggagatggggagcctcaaggacgaggagcggctcgccacgcgtggctggtaa
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