Rubrobacter tropicus: GBA63_10330
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Entry
GBA63_10330 CDS
T06510
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rub
Rubrobacter tropicus
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rub03016
]
GBA63_10330
Enzymes [BR:
rub01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GBA63_10330
Transfer RNA biogenesis [BR:
rub03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GBA63_10330
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
QIN83001
UniProt:
A0A6G8Q945
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All DBs
Position
2111465..2112685
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AA seq
406 aa
AA seq
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MNVHDSDRMRRMILDAGYAEVPRYEDADIVILNTCYVRENAVDRVRGHLGELTRLKRSGR
LKKVALTGCIGAAEESETLRRQFGIDLVLGTHNTYELAEFVGLPTMEETYTPELPGTEGG
HSAFVTIMTGCNYRCSYCIVPTVRGRMVCRSKESILSEVDRLVEGGTGYVTLLGQTVDAW
RQDGERFCDLLEAVSERAPRVWFTTSHPSNMEDRTLRAIGERETIVKRLHLPVQSGSDRM
LKIMHRGYKAERYRRKIEVFREAAPGGTLSTDIIVGHPGETEEDHEATLKLVEDCQFDSA
YVFKFSPRDGTEAANIGGVVSQEVAQKRFVEVLRAVEGNAFRRNRAKIGAVEDVYVRHGA
NEEGRAIGETWSGHAVHLKTGAVPGSYVRARVGSAGPHVLYAEPIR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcacgactctgacaggatgcggcgcatgatcctggacgcagggtacgccgag
gtcccgcgctacgaggacgcggacatagtcatcctcaacacctgctacgtgcgcgagaac
gccgtggaccgcgtccgcggacacttgggcgaactcacccgcctcaagaggtccggccgc
ctcaaaaaagtggccctcaccggctgcataggagccgccgaagaatccgaaaccctccgc
cgccaattcggtatagacctcgttttgggtactcataatacgtacgagttggccgagttc
gtggggttacccacgatggaagagacgtacactcccgaactaccggggacggaaggcgga
cactcagctttcgtcacgataatgaccggctgcaactaccggtgcagctactgcatagtc
ccgaccgtgaggggaaggatggtgtgcaggtcgaaagagagcatcctctctgaggtggat
cggctagtggagggcggcaccgggtacgtgacgctgctcgggcagacggtggacgcctgg
aggcaggacggcgagaggttctgtgatctgctggaggcggtctcggagcgggcgccgagg
gtgtggttcaccaccagccacccgtccaacatggaagacaggactctgcgggccatcggc
gagagggagacgatagtaaagcggctgcatttgccggtccagtccggttcggatcggatg
ctgaagatcatgcaccgcggttacaaggcagagaggtacaggcgaaagatagaagtcttc
cgggaggccgcgccgggcgggaccctgagcacggacatcatagtcgggcatccgggggag
acggaggaagaccacgaggcgaccttgaagctcgtcgaagactgccagttcgactccgcg
tacgtcttcaagttctcgccgagggatgggaccgaggcggctaacatcgggggtgtcgtt
tcgcaggaggtggcgcagaagaggttcgtcgaggtgttgcgggccgtcgagggcaacgct
ttcaggcggaacagggcaaagataggggccgtcgaggacgtgtacgtccgtcacggggcc
aacgaggaagggcgcgccataggcgagacctggagcgggcacgccgtccacctaaagacg
ggagcggtgcccgggtcgtacgtgagggcaagggtgggatcggccggccctcacgtgctc
tacgcggaaccgatccgctaa
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