KEGG   Rubrobacter tropicus: GBA63_12735
Entry
GBA63_12735       CDS       T06510                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rub  Rubrobacter tropicus
Brite
KEGG Orthology (KO) [BR:rub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rub03019]
    GBA63_12735
Messenger RNA biogenesis [BR:rub03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GBA63_12735
SSDB
Motif
Pfam: HD tRNA_anti-codon HDOD DUF3944 TraI_2
Other DBs
NCBI-ProteinID: QIN83404
UniProt: A0A6G8QA83
LinkDB
Position
complement(2576195..2577076)
AA seq 293 aa
MDAAVRKDSRGAPYLSLKLVDRTGSVDARMWGRLPEDLVQEIPGPAYVDVEGNAHEYRGT
LQVKLDRLRVMRRDEVDEEDYLPATEQDRRALAAELEEAGRTLESEDLRQLFELMVSDED
FWEAFCEAPAAKGMHHARIGGLLEHSVGCLRIARALAEIYPVDRDLLFFGAIFHDVGKVR
ELSWDSGGFAYTTEGRLLGHVVLGERLVSSYIRMLPAFPEELRLKLSHVLISHQGETEYG
SPERPKTMEALLVHLIDNLDARAAMYIESTQNVSPGGWSHHENPLRRALYVPE
NT seq 882 nt   +upstreamnt  +downstreamnt
gtggacgccgcggttcgcaaggatagccgcggcgccccctacctctccctgaagttggtg
gaccgcacgggctccgtggacgcccgcatgtggggccgcctgccggaggacctggtgcag
gagatcccgggccctgcctacgtggacgtggagggcaacgcccacgagtaccgcggcacg
ctgcaggtgaagctcgaccgcctgcgggtgatgcgccgcgacgaggtcgacgaagaggac
taccttccggccaccgagcaggaccgccgggctctcgccgccgaactcgaagaagccgga
cggacgctcgaaagcgaggacctccgccagctcttcgagctgatggtctcggacgaggat
ttctgggaggcgttctgcgaggctcccgcggccaaggggatgcaccacgccaggatcggc
ggcctgctggagcactcggttggttgtctgcggatcgctcgcgctctggccgagatctac
cccgtggaccgcgacctgttgtttttcggggcgatcttccacgacgtcggcaaggtccgc
gagctctcgtgggactccggcggcttcgcctacaccaccgaaggacgcctcctcggccac
gtcgtcctcggcgaacgcctcgtctcctcctacatcagaatgttaccggcgttccccgag
gagctacgcctcaagctctcgcacgtcctgatctcgcaccagggcgagaccgagtacggc
tcccccgaacgccccaagaccatggaagccctcctcgtccacctcatagacaacctcgac
gcgagggctgccatgtacatagagtcgacccagaacgtgagccccggcggctggagccac
cacgagaaccccctgagacgcgccctgtacgtgcccgagtag

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