Rubrobacter tropicus: GBA63_14220
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Entry
GBA63_14220 CDS
T06510
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rub
Rubrobacter tropicus
Pathway
rub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GBA63_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rub03021
]
GBA63_14220
03400 DNA repair and recombination proteins [BR:
rub03400
]
GBA63_14220
Enzymes [BR:
rub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GBA63_14220
Transcription machinery [BR:
rub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GBA63_14220
DNA repair and recombination proteins [BR:
rub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GBA63_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QIN83663
UniProt:
A0A6G8QB53
LinkDB
All DBs
Position
complement(2868465..2872349)
Genome browser
AA seq
1294 aa
AA seq
DB search
MQGLERDIDINKLEKISIGLASAEEIREWSRGEVTKPETINYRTLRPEKDGLFDERIFGP
SKDWECYCGKYKRIRFKGIICERCGVEVTRARVRRDRMGHIELAAPVAHVWFVKGVPSRM
GYLLDISPKELDRVLYFASSIVTWVDREERANDIDLLRGRVEDEIKQLEQDRDEEIDQVH
ALRTKRESVINGDSSPDEFTEEFAEIEEENREATVAKVHKEAEDSIADIQRSTTDQIALV
RRSWEEFQTLEPRQIVDDEELFREMKDRFGDEYGYGVYFRGGMGAEAVKDLIQQVDLVEE
AQDLRDTVVSSKGQKRQKAIKRLKVVDAFRTSGNGPEWMIMEAIPVLPPDLRPMVQLDGG
RFATSDLNDLYRRVINRNNRLRRLLDLGAPDVIVNNEKRMLQEAVDALFDNGRRGRAVTG
AGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPGLKMHQCGLPRLMAVELFK
PFVMKVLVDRALAPNIRSAKQMVERLRPEVWDVLEDVIKEHPVLLNRAPTLHRLGIQAFE
PVLVEGKAIQVHPLVCSAFNADFDGDQMAVHVPLSPEAQAEARVLMLSTQNILLPANGFP
IAVPSQDMVLGLYYITSTGDDFENEEPKALISSYDEAEAAYKEGTLKIHNKVIARRNGGR
IETTLGRVLFNENVEQTLRDYLGDSYDPAEYPYVNHVLKKGEIKSLVSEFVERYPTELVS
QLLDTLKRVGFHTATKAGISVGKNDIVVPEQKEGILENYQGQVDEVEEQWDQGFISDEES
LERTIALWTQAKNEVEDAMKGNLWRLNPIFMMADSGARGNYSNFTQLAGMRGLMTNTKGE
IIPEPVKSNFIEGLSVLEYFTSTHGARKGQADTALRTADSGYLTRRLVDVSQDVVVNDED
CGTNGYVDLPLYLEGGRGDANDSVAARFLARDLVNPETGEVVAEAGTDIMPRLLAKWREE
LPRETLVPVRTPAKCENPHGVCQACYGRALSTYRAVDVGEAVGIIAAQSIGEPGTQLTMR
TFHTGGIAGEDITAGLPRVVELFEARHPKAEATLAEIDGIVSLEEADSDRMITVTITSPD
NTEVRDYKVERRLLKPEFVEGAEVRANTPITDGSVYPHAILENDLRYDRGTTTTERYLVG
EVQKVYRAQGVDIHDKHIEVIVRQMLRKVVIDDPGDTKLLPEQVADKFNVLAENARVEEE
EGKPATYHTILLGITKASLATDSFLSAASFQETARVLTDAAIEGKQDALAGLKENVIIGK
LIPAATGLPRYRQLTVAVEGYKAREVDELDIAAS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
gtgcagggacttgagcgcgacatagacataaacaaactggagaagatctccatcggcctc
gcctcggccgaggagatccgggagtggtcccgcggcgaagtaaccaagcccgagaccatc
aactaccgcactttgcgtcccgagaaggacggcctcttcgacgagcgcatcttcggcccg
tcgaaggactgggagtgctactgcggcaagtacaagaggatccggttcaagggcatcatc
tgcgagcgctgcggcgtcgaggtgacgcgggcgagggtgcgccgcgaccggatgggccac
atcgagctcgccgcgcccgtggcgcacgtgtggttcgtcaagggcgttccgagccggatg
ggctatttgctcgacatcagcccgaaggagctcgatcgggttctgtacttcgcgagctcc
atcgttacgtgggtggaccgcgaggagcgggcgaacgacatagacctgctccgcgggcgg
gtcgaggatgagatcaagcagctagagcaggacagggacgaggagatcgaccaggtccac
gccctgcgcaccaagcgcgagagcgtcataaacggcgacagctccccggacgagttcacc
gaggagttcgcggagatcgaggaagagaaccgcgaggcgacggtcgccaaggtccacaag
gaggccgaggattccatagcggacatccagcgctccacgacggaccagatcgcgctcgtc
aggcgttcctgggaggagttccagaccctggagccgcgccagatcgtggacgacgaggaa
ttgttccgcgagatgaaggaccgcttcggcgacgagtacggctacggcgtgtacttccgc
ggcggcatgggcgccgaggccgtcaaggacctcatccagcaggtcgacctcgtcgaggag
gcccaggacctgcgcgacaccgtcgtctcctccaagggccagaagcgccagaaggccatc
aagcgcctgaaggtcgtcgacgcgttccgcaccagcggcaacggacccgagtggatgatc
atggaggccatcccggtcctcccgcccgacctccgcccgatggtccagctcgacggcgga
cgcttcgcgacctccgacctgaacgacctgtaccggcgcgtcataaaccggaacaacagg
cttcgtcgcctgctcgacctcggggctcccgacgtgatcgtgaacaacgagaagcggatg
ctccaggaggcggtcgacgccctcttcgataacggccgccgtggccgcgccgtcaccggc
gccggcaaccgcgccctgaagtcgctcagcgatatgctcaagggcaagcagggcaggttc
cgccagaacctgctcggcaagcgcgtcgactactccggccgttccgtcatcgtggtcggc
cccgggctcaagatgcaccagtgcggcctgccgcgcctgatggcggtcgagctgttcaag
ccgttcgtgatgaaggtgctcgtcgaccgggcattggccccgaacatccggagcgccaag
cagatggtcgagcggctgcgtcccgaggtctgggacgtcttggaggacgtgatcaaggag
cacccggtgctgctcaaccgcgcgccgacgctccaccgcctgggcatccaggccttcgag
ccggtgctggtcgagggcaaggccatccaggtccatccgctcgtgtgttccgcgttcaac
gcggacttcgacggcgaccagatggcggtccacgtgccgctctcgcccgaggcgcaggcc
gaggcccgcgtcctgatgctctcgacgcagaacatcctgcttccggccaacgggttcccg
atcgccgttccctcgcaggacatggtgctcggtctctactacatcacctccaccggcgat
gatttcgagaacgaggagccgaaggcgctcatctcctcctacgacgaggccgaggccgcg
tacaaggaggggacgctcaagatccacaacaaggtcatcgcccggcgcaacggcggtcgg
atagagacgaccctcgggcgcgtcctcttcaacgagaacgtcgagcagaccttgagggat
tatctgggcgactcctacgacccggccgaatacccctacgtcaaccacgtgttgaagaag
ggcgagatcaagtcgctcgtctccgagttcgtcgagcgctacccgaccgagctcgtgagc
cagcttctcgacaccctcaagagggtgggcttccacacggctacgaaggctggcatctcc
gtcggcaagaacgacatagtcgtgccggagcagaaggaaggcatcctggagaactaccag
gggcaggtcgacgaggtcgaggagcagtgggaccagggctttatctccgacgaggagagc
ctggagcggaccatcgccctgtggacgcaggccaagaacgaggtcgaggacgccatgaag
ggcaacctctggcgcctgaacccgatcttcatgatggccgactccggcgcccgcggtaac
tactcgaacttcacccagctcgccggcatgcgaggcctgatgaccaacacgaagggcgag
atcatcccggagcccgtgaagtccaacttcatagaaggcctctcggtcctcgagtacttc
acctccacccacggcgccaggaagggccaggccgacacggccctgcgtacggcggactcg
ggctacctgacccgccgcctcgtcgacgtctcccaggacgtcgtcgtgaacgacgaggac
tgcggcaccaacggttacgtcgacctgccgctctacctcgaaggcggaaggggagacgcg
aacgactccgtcgcggcccgctttctggcccgcgacctcgtgaacccggagacgggcgag
gtcgtcgccgaggccggcacggacatcatgccgcgcctcctcgcgaagtggcgggaggag
ctgccgcgcgagacgctggtgccggtaaggacaccggcgaagtgcgagaacccgcacggc
gtctgccaggcttgctacggacgagccctctccacctaccgagcggtagacgtgggcgag
gccgtcggcatcatcgcggcccagtctatcggcgagccgggcacacagctcacgatgcgt
accttccacaccggcggcatcgccggcgaggacatcaccgcggggctcccgagggtggtc
gagctcttcgaggccaggcaccccaaggcggaggcgacgctggccgagatcgacgggatc
gtcagcctggaagaggctgactcagaccgcatgatcacggtgaccatcacctccccggat
aacaccgaggtgagggactacaaggtcgagcggaggctcttgaagccggagttcgtggaa
ggcgccgaggtccgggcgaacaccccgatcacggacggctccgtctacccgcacgccatc
ctcgagaacgacctgcgctacgaccgcggcaccaccaccaccgagcgctacctggtgggc
gaggtccagaaggtctaccgggcccagggcgtggacatccacgacaagcacatcgaggtg
atagtccgccagatgctgcgcaaggtcgtcatagacgacccgggcgacacgaagctcctc
cccgagcaggtcgccgacaagttcaacgtcctggccgagaacgccagggtcgaagaggag
gagggcaagcccgccacctaccacacgatcctgctcggcatcaccaaggcctcgctcgcc
acggacagcttcctctccgccgcctctttccaggagaccgcccgcgtcctcaccgacgcg
gccatcgagggcaagcaggacgcgctcgccggcctcaaggagaacgtcatcatcggcaag
ctcatccccgcggcaaccggcttgccccgctacaggcaactcaccgtcgccgtcgagggg
tacaaggcccgcgaggtggacgagctggatatcgctgcttcatag
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integrated database retrieval system
