Rubrobacter tropicus: GBA63_16850
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Entry
GBA63_16850 CDS
T06510
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rub
Rubrobacter tropicus
Pathway
rub03030
DNA replication
rub03430
Mismatch repair
rub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBA63_16850
03430 Mismatch repair
GBA63_16850
03440 Homologous recombination
GBA63_16850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rub03032
]
GBA63_16850
03400 DNA repair and recombination proteins [BR:
rub03400
]
GBA63_16850
Enzymes [BR:
rub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBA63_16850
DNA replication proteins [BR:
rub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GBA63_16850
DNA repair and recombination proteins [BR:
rub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GBA63_16850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QIN84129
UniProt:
A0A6G8QCC2
LinkDB
All DBs
Position
complement(3384390..3386192)
Genome browser
AA seq
600 aa
AA seq
DB search
MSLYGFVKDREPVGPEEVCAGFLSLPDANGDARAIVERVVGDDPRFAWEDDVLKTADVAA
LALEDAPYVVFDVETTGASAGKGGGITEIGALKLVRGQVVEEFSTLVNPGRKIDPFVVRL
TGITDRMVSGAPPVSEVMPRFEEFVEGSVVVGHNVQFDCGFVAAARGGVPLPNPVLDTLK
LARCLVPGLRRYRLSALVSHFGVRQAPNHRALADASATTEVFQRLLKLLRSAGVRSVGEA
GTIRGGKGRIKPQKQHLAEHVPNTPGVYYFVDKNGGVLYVGKAKDLRARVRTYFNGGDGR
RKVGRLVEEVAEVQVKETESELHALILEAREIKRLLPRYNSVGRDDKASWFIRLDTNEPY
PMPVRVTENAPEDGVVHLGPYRSAGVLDTCIEALGRVFPLKRCPGDGEACFYGQMGRCAP
CAGMGEEEYRREVVDEIVALLRGEGGEEHLHALVLERKRLARALEFEAAARLRDLIAGIE
RVRLARSVVSGEGAQAVVAPSTEPGVIEVFVLSEGRLITHRGFEAGDAAGLTTFAEEALQ
RREDLPPAGKNGSNEARIVAAYLRRRSGVVEAVRLGEAGDLVKAAERVEEAVGEPEVPLA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
attagcctctacggcttcgtaaaggaccgcgagccggtcggccccgaggaggtctgcgcc
ggttttctctccctgccggacgccaacggggatgccagggcgatcgtcgagagggtcgtc
ggggacgaccccaggttcgcctgggaggacgatgtcctgaagaccgctgacgtggcggcg
ctcgcgctcgaagatgctccgtacgtggtcttcgacgtcgagaccacgggagcctccgcc
ggaaaaggcggcggtatcacggagatcggggccctcaagctcgtccgcggccaggtggtc
gaggagttctcgaccctcgttaaccccgggcgtaagatagacccgttcgtcgtccgcctg
accggcataacggaccgcatggtctcaggcgcccctcccgtctccgaggtgatgccccgc
ttcgaggagttcgtagagggctccgtcgtggtcggccacaacgtccagttcgactgcggc
ttcgtcgccgcggcccgcggcggggtgccattgcccaaccccgtcctcgacaccttgaag
ctcgcgcgttgcctggttccgggcctgaggcgctaccgtctgagcgcactcgtctcgcac
ttcggggtgcgccaggcgccgaaccacagggcgctggccgacgcatcggcgactaccgag
gtctttcagaggcttctgaagctcctgcgctccgccggggtgaggagcgtcggggaggcc
ggcacgatccggggcggcaaggggcgcatcaagccgcagaagcagcacctcgccgagcac
gtcccgaacacgcccggcgtctactacttcgtggacaagaacggcggagttctctacgtg
ggcaaggcgaaggatctgagggcgcgggtacggacgtacttcaacgggggggacgggagg
cgcaaggtgggccggctcgtcgaggaggtcgccgaggttcaggtcaaggagaccgagagc
gagctgcacgcgctaatactggaggcgcgggagatcaaacgcctcctgccccgctacaac
tccgtcggccgcgacgacaaggcgagctggttcataaggctcgacaccaacgagccgtac
ccgatgccggtcagggtgacggagaacgcgccggaggacggcgtggtccacctcgggccg
tacaggagcgcgggcgtcctcgacacctgcatcgaggccctcggcagggtcttccccctc
aagcgctgcccgggggatggggaggcgtgcttctacggccagatgggccgctgcgccccg
tgcgccgggatgggcgaggaggagtaccgccgggaggtcgtggacgagatcgtggcgctc
ttgcggggcgagggcggcgaggagcacctccacgccctggtcctggagcgcaaacgcctg
gcgcgggcgctcgagttcgaggccgcggcgcgcctgcgggacctgatcgccggcatagag
cgggttcgtctcgcgcggtcggtcgtgagcggggagggtgcccaggccgtcgtcgccccc
tcgacggagccgggcgttatagaagtctttgtcttgtcggagggacgcctgattacgcac
cgcggtttcgaggccggggacgcggccggtcttacgacgttcgcggaggaggcgcttcag
aggcgggaggacctgccgccggccggcaagaacggctccaacgaggccaggatcgtggcg
gcgtacctcagacgacgctccggggtggtcgaggccgtgcggctgggggaggcgggggat
ctcgtaaaagcggccgaaagggtcgaggaggccgtaggggagcccgaggtcccgttggct
tga
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