Rubrobacter tropicus: GBA63_19590
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Entry
GBA63_19590 CDS
T06510
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
rub
Rubrobacter tropicus
Pathway
rub02020
Two-component system
rub02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GBA63_19590
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GBA63_19590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rub03021
]
GBA63_19590
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rub02035
]
GBA63_19590
Transcription machinery [BR:
rub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GBA63_19590
Bacterial motility proteins [BR:
rub02035
]
Flagellar system
Flagellar assembly proteins
Stator
GBA63_19590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
KORA
DUF6456
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QIN84604
UniProt:
A0A6G8QDM5
LinkDB
All DBs
Position
complement(3970524..3971384)
Genome browser
AA seq
286 aa
AA seq
DB search
MNATHLWSRYLAAREDPDAGLTDARLRRLRILRDRLVAHYAPLAATAARRAAPKPPPPLD
ADDVVSWGMGGLLDAVETFEPDRGARFETHAFNKVRWRVLDEVRKADPLPRSARSRARAA
EAARASLRQTLGRAPTEEEVAAALGTQPRLLRNLARRELASVRPASLDAPVFPSADTATG
AGLHALLADPTDDPQEALDRSEERERVAGALDALDERSRLVVTAYFYRGMKLREIGAELG
LTEGRISQILRAALDALREDLASGLPRPQARCRAAQPAAPVRPDAA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccacgcacctctggtcgcgctacctcgccgcccgcgaagaccccgacgcgggt
ctcaccgacgcccggctcaggcgcctccggattctccgggatcgcctcgtcgcccactac
gccccgctcgccgccacggcggcacgtcgcgcggcgccgaaaccgccccctcccctcgac
gccgacgatgtcgtctcctggggcatgggcggcctgctcgacgccgtcgagaccttcgag
ccggacaggggcgcccgcttcgagacccacgcgttcaacaaggtacgctggcgcgtcctc
gacgaggtcaggaaggccgaccccctgccccgctcggcccgatcccgagcacgcgccgcg
gaggccgcccgggcaagtctccggcaaaccctcggccgcgcgccgaccgaggaagaggtc
gccgcggctttaggcacccaaccccgcctgctccggaatctcgcccgccgggagctcgcg
tccgtccgccccgcgtcgctggacgcccccgtgttcccgtcggccgacacggccaccgga
gccgggttgcacgcgctcctcgccgatcccaccgacgacccgcaggaggccctcgaccgc
tcggaggagcgcgagcgcgtcgccggcgccctcgacgccctcgacgagaggtcgcgcctc
gtcgtgaccgcctacttctaccgggggatgaagctaagggagatcggcgccgagctcggc
ctcaccgagggcaggatctcccagatcctgcgcgcggccctggacgccctgcgggaagac
ctcgcttccgggctcccccgcccacaagctaggtgccgggcggcgcagccggcagccccc
gtacggcccgacgccgcgtag
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