Ruminococcus sp. FMB-CY1: LCN94_00050
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Entry
LCN94_00050 CDS
T10118
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ruc Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruc03032
]
LCN94_00050 (gyrA)
03400 DNA repair and recombination proteins [BR:
ruc03400
]
LCN94_00050 (gyrA)
Enzymes [BR:
ruc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LCN94_00050 (gyrA)
DNA replication proteins [BR:
ruc03032
]
Prokaryotic type
DNA Topoisomerases
LCN94_00050 (gyrA)
DNA repair and recombination proteins [BR:
ruc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCN94_00050 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WBX57541
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Position
9263..11803
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AA seq
846 aa
AA seq
DB search
MDNENMENGVFNHGRIRDVDVQEEMKSSFLDYSMSVIISRALPDVRDGLKPVHRRILYTM
YEKGLDPNKPYHKCADTVGAVLGAYHPHGDASVYDALVRLAQDFSMRYMLVDGHGNFGSV
DGDPPAAYRYTEARMSKISCEMLTDIDKKTVDFQPNFDDRLEEPTVLPSRFPNLLVNGSD
GIAVGMATKIPPHNLGETIDAACALIDNPDIDLAGLMDYMPGPDFPTGGIIMGRSGIRAT
YATGRGKITVRAKTEIVEAKNGRYKIIVTELPYQVNKARLIEYIADLVKDKRIDGISNIE
DHSDRQGMHIEIDVKREASASIVLNNLFNLTQLQTTFGAIMLAIVDGVPKILNLKEMLTE
YVNFQQEIIRRRTEFDLKKAKDREHILEGLKIAIDFIDEVISIIRNSKDQATAKVNLMER
FGLDDVQAQAIVQMRLGQLTNMERTKIEDEIAALKTKIEEYNAILADEGRQREIIKEELI
VIRNKFADPRRTEICAVNGEVDIEDLIPNQECVLTLTQFGYVKRLAVDTYKIQNRGGRGV
SGMSRREEDVATEMFVINSHDYVLFFTDKGRVYRLKCYEVPEGSRQSKGMNIANLLPIAA
DEKVTSMIRVPEFDEEKYLVMVTKQGIIKRISLNAYNTARKGGLIALELNEGDELAWVRL
TDGNQQVIVATKNGLAIRFEETDVRPMGRQARGVKAISLREGDCVVGMCVVANDDLILTA
SETGFGRISNVSDYRLQSRGGKGITNYHTEKYGNVAAVSAVKLDEDIIIISQEGVIIRIA
ADTVRICNRPSKGVTLMRIGENDKVVTVARAPHEDSESEKTEETAEEETSEENTAPETNA
EENTEE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgaaaatatggaaaatggagtatttaatcacggaagaataagagatgtcgat
gtgcaggaagaaatgaaatcaagttttcttgactactcgatgagcgttattatctcccgt
gcgttacctgatgttcgtgacggtttaaaacctgttcacaggcgtattctctacacaatg
tacgaaaagggtcttgaccctaacaagccgtaccataagtgcgcagacaccgtaggtgct
gtgctcggtgcgtatcatcctcacggtgatgcgtctgtttacgatgcgcttgttcgactt
gcacaggacttttcaatgagatatatgcttgttgacggccacggtaacttcggttcggtt
gacggtgacccgcctgccgcatacagatacacagaggcgagaatgagcaagatttcttgc
gaaatgcttaccgatattgacaaaaagacggttgattttcagcctaactttgacgacaga
cttgaagagccaaccgtacttccgagcagatttcctaacctgcttgtaaacggttctgac
ggtatcgccgtaggtatggctacaaagattcctccgcacaacctcggcgaaaccattgac
gccgcttgtgcacttattgataatccagatattgaccttgccggtcttatggactatatg
cccggccctgactttccgacaggcggcattattatgggcagaagcggtataagagccact
tatgcgaccggcagaggtaaaattaccgtgagagccaaaacagagattgtagaggctaaa
aacggcagatacaagattattgttaccgaactgccttatcaggtcaacaaggcaagactt
atcgaatacattgccgaccttgtgaaagacaagagaattgacggtatttctaacattgag
gaccactccgaccgtcagggtatgcatattgaaattgatgttaagcgtgaagcgtctgca
agcattgttcttaacaacctctttaatcttacacaattacagacaactttcggcgcaatt
atgcttgcaattgttgacggtgttcctaagatattaaaccttaaggaaatgcttacagag
tatgtaaacttccagcaggaaatcatacgcagaagaacggaatttgaccttaaaaaggca
aaggacagagagcatatccttgagggcttgaagattgcgattgactttattgacgaggta
atctcaatcatcagaaatagtaaagaccaggctaccgctaaggtaaaccttatggagcgc
tttggtcttgacgatgttcaggcacaggcaattgttcagatgcgtttaggtcagctcaca
aatatggagcgcacaaaaattgaagacgaaattgccgctttaaagacaaaaatcgaagaa
tacaacgctattcttgccgatgagggcagacagcgtgaaattatcaaggaagagcttatt
gtaatcagaaataagtttgcagatccgagaagaacggaaatctgcgctgtcaacggcgaa
gttgacattgaggatcttattccgaatcaggaatgcgtgctcacacttactcaattcggc
tatgtaaagcgccttgctgttgatacctacaagattcagaacagaggcggccgtggcgta
tcgggtatgtcacgcagagaagaagatgttgcgactgaaatgttcgtaattaattctcac
gattatgtactgttctttaccgataagggcagagtgtacaggctcaagtgctatgaagtg
ccggagggaagccgtcagtcaaagggtatgaatattgcaaatctgctcccgattgcggcg
gacgaaaaggtaacttctatgattagagtgcctgaatttgacgaggaaaagtaccttgtt
atggttacaaagcagggtattataaagagaatttctctcaatgcatataataccgcaaga
aaaggcggacttattgcccttgaacttaacgagggtgacgagcttgcatgggtaagactt
acagacggcaatcagcaggttattgtggctacaaagaacggccttgctatcagatttgaa
gaaaccgatgttcgtcctatgggcagacaggcaagaggcgttaaggctatttctctgcgt
gagggcgactgcgttgtgggtatgtgcgttgttgcaaatgatgaccttattcttactgcg
tccgaaacaggctttggcagaatttcaaatgtaagcgactaccgcttgcagagccgtggc
ggtaagggtattaccaactaccacaccgaaaaatacggaaatgttgcggctgtcagtgcg
gttaagcttgacgaggatattatcattatttcgcaggagggcgtaattatcagaattgcc
gccgatactgtaagaatctgtaacagaccgagcaagggcgttactcttatgagaataggc
gaaaacgataaggtagttactgttgcaagagcacctcacgaggacagtgagagcgaaaaa
acagaggaaacagccgaagaagaaacttccgaggagaatactgcccctgaaacaaatgcc
gaagagaatacagaagaataa
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