Ruminococcus sp. FMB-CY1: LCN94_01175
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Entry
LCN94_01175 CDS
T10118
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCN94_01175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ruc03021
]
LCN94_01175
03400 DNA repair and recombination proteins [BR:
ruc03400
]
LCN94_01175
Enzymes [BR:
ruc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LCN94_01175
Transcription machinery [BR:
ruc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCN94_01175
DNA repair and recombination proteins [BR:
ruc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCN94_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Hpr_kinase_C
I_LWEQ
SAM_EPH
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
WBX57747
LinkDB
All DBs
Position
243666..244619
Genome browser
AA seq
317 aa
AA seq
DB search
MIEIEKPRIETEELTEDGKHGRFVVEPLERGFGNTLGNSLRRVLLSSLEGCAVTSIKIDG
VLHEFSTIPGVKEDVTEIVLNMKSVVAKLYETSPKVVEISAQGPCVVTAGDIKCDSEVEI
LNPEQHIATLGEDAKLNMEITIDKGRGYIPAERNKLISGNNVIGVLPIDSIYTPVLKVNY
TVDNTRVGQITDYDKLTLDVWTNGVINAQEAVSLAAKVLTEHLNLFVNLSDKASSAEVMV
EKDDKGKEKILEMTIEDLDLSVRSFNCLKRAGINTVEDLINKSEEDMMKVRNLGRKSLEE
VIQKLNSLGFSLQKEDE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccaagaattgaaaccgaggaattaaccgaggatggaaagcac
ggcagatttgttgttgaaccgctcgagcgtggctttggcaacacattgggcaacagcctg
cgcagagttttgctttcttctcttgaaggctgtgccgttacatctatcaagattgacgga
gttcttcacgaattttcaactattcccggcgtaaaggaagacgttacggaaattgttctt
aatatgaaaagcgttgttgcaaagctttacgaaacaagcccaaaggttgttgaaatctca
gcacagggtccttgcgtagtaactgccggagatattaaatgtgacagcgaggttgagatt
ctcaatcctgagcagcacattgcaactctcggtgaggatgcaaagctcaatatggaaatc
accattgacaagggcagaggatacatccctgctgaacgcaacaagcttattagcggcaat
aatgttattggcgttttacctattgattctatttatactcccgtattaaaggtaaattac
acagttgacaacactcgtgtaggtcagattactgactatgacaaactcacacttgatgtt
tggacaaacggtgttatcaatgcacaggaggctgtttcacttgcagctaaggtgcttacc
gagcacttaaacctctttgtaaacctttcggataaggcttcaagcgcagaggttatggtt
gaaaaagacgataagggcaaggagaaaatccttgaaatgacaattgaggatctcgatttg
tcagttcgttctttcaactgcttaaagcgtgccggtattaatacggtagaagatttgatc
aacaagtcagaagaggatatgatgaaggtaagaaacctcggcagaaaatctctcgaggaa
gtaatccagaaactcaattctctcggatttagtcttcagaaggaagacgaataa
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