Ruminococcus sp. FMB-CY1: LCN94_01220
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Entry
LCN94_01220 CDS
T10118
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
ruc Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ruc03000
]
LCN94_01220
Transcription factors [BR:
ruc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LCN94_01220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_Mga
HTH_5
HTH_IclR
HVO_A0114
HTH_24
MarR
Put_DNA-bind_N
HVO_A0261_N
Fe_dep_repress
WHD_RNase_R
HTH_65
HTH_34
HTH_20
Mga
SpoIIID
WHD_GTF3C1
HTH_AsnC-type
FeoC
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
WBX57756
LinkDB
All DBs
Position
257322..258071
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AA seq
249 aa
AA seq
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MLTQERYQTILQILSEKNTVTVQELTKLLNTSESTIRRDLTTLDEMGKLNKVFGGATSIH
QLSGVYEADVKSREGIMLDEKKAIAIYCAKLINDTDFVYIDAGTTTDILTDYITNKNATY
VTNGITHAKNLIRKGLTTYTIGGRIKPATEAIMGAEGLRSLKTFNFTKSFMGTNGIELNA
GFTTPDMEEGLIKEEVIKRSYMSFVLADNTKFRKVFPITFAELKDCCIITDKLPYNEFSE
KTIIKEVMK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcttactcaggaaagatatcaaacaatacttcaaatattaagcgagaaaaacacagtc
acggtacaggagcttacaaagcttttgaatacatcggagtcaaccataaggcgtgacctc
acaacacttgacgagatgggcaagcttaataaagtattcggaggagcaacctcaattcac
cagctttcgggcgtatatgaggctgatgtgaaatcaagagaaggtataatgcttgacgaa
aagaaagcaatcgcaatttattgtgcaaaacttattaacgatacggattttgtatatata
gacgcaggcacaaccactgatattctcacagattacattacaaacaaaaacgcaacctat
gttacaaacggtattacccacgcaaaaaatcttataagaaagggacttacaacatacaca
atcggcggcagaatcaaacctgctaccgaggctattatgggcgcggaaggtttaaggtcg
ctgaaaacctttaactttacaaaatcctttatgggtactaacggaattgaattaaatgca
ggctttaccactcctgatatggaagagggcttgatcaaagaggaagttataaaaagaagt
tatatgtcttttgttcttgccgacaataccaaattcagaaaggtatttccgattaccttt
gcagagcttaaagactgctgtattataaccgacaaactcccgtataatgagttttcggaa
aaaacaataatcaaggaggttatgaagtga
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