KEGG   Ruminococcus sp. FMB-CY1: LCN94_01675
Entry
LCN94_01675       CDS       T10118                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ruc  Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:ruc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ruc02048]
    LCN94_01675
Enzymes [BR:ruc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LCN94_01675
Prokaryotic defense system [BR:ruc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LCN94_01675
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N_2 AAA_34 HSDR_N AAA_11 Helicase_C SLFN-g3_helicase AAA_22 CobA_CobO_BtuR nSTAND3
Other DBs
NCBI-ProteinID: WBX57845
LinkDB
Position
complement(331517..333883)
AA seq 788 aa
MILDKKQMTEEDIKLQYITPAVQAKWGLDRITMETKITDGRINLKGNIVTREKPKKADYV
LYLTKNKPIAIVEAKDNNHFISYGLQQAITYAKMQDIPFAYSSNGDGFQEHDLLTGLERT
LPMDEFPTVDELTARWESETNGGKGISDNERKIINQPYYSSQNTYDPRYYQRNAINRTVE
AIANGQERLLLVMATGTGKTYTAFQIVYRLLKSRLKKKVLYLADRNILVDQSIQQDFSPL
EKVIHKINFAKDDPVTITSHEVYFSLYQQLAGNEENEDEESGEETVARFAKLFNQDFFDL
IIVDECHRGSAKKDSNWRKILDYFFSATQIGMTATPKETKYISNIDYFGEPVYTYSLREG
IEDGFLAPFRVINITTDISDGWRPYKGQLDKFGNEIEDRIYTNSDFDYNIILEDRTYEVA
REITEYLKSTDRMQKTIVFCATEDHAERMRIALNNLNADMVKENPDYVVRITGSDTYGKS
KLDYFISVSAPYPVIATTSKLLSTGADCKMTKLIVLDEMINSMTEFKQIIGRGTRLREKE
GKNHFVVMDFRNVTRLFSDPDWDGPIEIVEGFDPNHKPTPKPDTPGNGSDSVSPPPTVDK
YVVDENGCDVHIIGKRVEVYDALGKLLRQESIVDYTKSNILGKYASLDNFISKWTSEEKK
EAIRGLLKEQGIDLEQMKAEQGMTDVDDFDFICHVAFNQKPLTRKERANNVKKRDFLSKY
SGVAREVLEALLDKYMNTGIYEIEKTEILQLDPFKKFGKPSKIATYFGGKAGYIQAVKAL
EEELYKAG
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgattttagataaaaagcagatgactgaggaagacataaagctacaatatataactcct
gcagtacaagcaaaatggggactcgaccgtattacgatggaaaccaaaataacagacggt
cgcatcaatctgaaaggaaatattgtaacccgtgaaaaaccaaagaaggctgattatgtt
ctttacttaacaaaaaataaacctattgcgattgttgaagccaaagataataatcatttt
atatcttacggtttgcagcaagcgattacctatgccaaaatgcaggatattccgtttgca
tacagttcaaacggtgacggatttcaggaacacgaccttctgactggtttggaacgtaca
ctgcctatggacgaatttccgactgtggatgaacttactgccagatgggaaagcgaaaca
aacggcggcaaaggcatatctgataacgaaagaaaaataatcaatcagccttactactca
agccagaacacatatgatccgagatattatcagcgtaacgctattaaccgtaccgttgaa
gcaatcgcaaacggacaagagcgtttactgctcgttatggcaacgggtacaggcaaaacc
tatacggcatttcagattgtttaccgccttttaaaaagcagactcaaaaagaaagttctg
tatttggctgaccgcaatattctcgtggatcagtcgattcagcaggatttctctcctctt
gaaaaagtaatacataagataaattttgcaaaagacgatcccgttaccataacttctcac
gaggtatatttttctctttatcaacagcttgcaggcaacgaagaaaacgaagatgaagaa
agcggtgaagaaacagttgctcgatttgcaaagttatttaatcaggatttctttgaccta
attattgttgatgagtgccatcgaggttctgcaaaaaaggacagcaactggcgcaaaatt
cttgattatttcttctctgctacacaaatcggtatgactgcaactccgaaggaaaccaaa
tatatttcaaacattgattactttggagagcctgtatatacatacagtttgcgagagggt
attgaagacggctttcttgctccgttcagggttataaatataacaaccgacatttcagac
ggctggcggccttacaagggacagcttgataaattcggaaatgaaattgaagatcgcatt
tatactaacagcgactttgattacaatattattcttgaagaccgcacatacgaggttgca
agggagataaccgaatatctcaagagtaccgacagaatgcagaaaaccatcgtattttgt
gctactgaagatcacgcagagcgtatgcgtattgcgctgaataatctcaacgccgatatg
gtcaaagaaaatcccgactatgttgttcgtatcacaggctccgatacttacggcaaaagc
aagcttgactactttatttccgtatctgcaccctatccggtaattgcaacaacctcaaag
cttctttccacaggagcggattgcaagatgacaaagctgattgttctcgatgaaatgatt
aactctatgacagaattcaagcagataatcggtcgtggcactcgtctgcgtgaaaaggaa
ggtaaaaatcattttgtcgtaatggacttccgcaatgtgacaagactgttttccgatccc
gattgggacggccctattgagattgtagaaggctttgaccctaatcacaagccgacaccg
aaacccgatacacccggtaatggcagtgattctgtttcgccaccccctactgttgacaaa
tatgttgttgatgaaaacggctgtgatgttcatatcatcggaaagcgggtggaagtttat
gacgccctgggcaagcttctccgtcaggaaagcattgttgactatacaaagtctaatatt
ctcggcaaatatgcttctcttgacaactttatttcaaagtggacttccgaagaaaagaaa
gaagctattcggggactgttgaaagaacaaggcatagaccttgagcaaatgaaagcggag
caaggtatgaccgatgtggatgattttgacttcatttgccatgtcgcctttaatcaaaag
ccgcttacacgcaaagagcgtgcgaataatgtaaaaaagcgtgattttctgagcaaatac
agcggtgttgcaagagaagtgctggaagccctcctcgataaatatatgaacacaggtatt
tacgaaattgagaaaaccgagattttacagcttgatccgtttaagaaattcggaaagccc
tcaaaaatcgccacctattttggcggaaaagcaggctacattcaagctgtaaaagcattg
gaagaagaactatataaggcaggttaa

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