KEGG   Ruminococcus sp. FMB-CY1: LCN94_01870
Entry
LCN94_01870       CDS       T10118                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ruc  Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:ruc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ruc03016]
    LCN94_01870 (truB)
Enzymes [BR:ruc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LCN94_01870 (truB)
Transfer RNA biogenesis [BR:ruc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LCN94_01870 (truB)
 Prokaryotic type
    LCN94_01870 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PUA_3
Other DBs
NCBI-ProteinID: WBX57881
LinkDB
Position
366494..367399
AA seq 301 aa
MNGVIIINKPQKFTSFDVVAVIRKLTGQRKIGHTGTLDPNATGVLPILLGNATKAQDIVP
NHDKSYTAKFRLGMTTDTLDIWGAVTSQSDKTATEADVLSALENFRGEIEQMPPMYSAIK
VNGQRLYDLARQGKEVERKPRKVTVYRLELKDFDEESQSGTLNISCSKGTYIRTIIDDLG
KILKTGAVMTALCRTAACGYNLADSITLETARELAEKGEISEHIMRTETLFASYRKIYVS
DAQAKRFSNGGELDMLRTALAKAKAQDKEIIRVSDRQGKFLGLGIADNESGQLKILKLFL
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacggtgtaataattataaataaaccgcagaaatttacttcgtttgatgtggtggct
gtgatacgaaagctgacaggtcagcgtaaaatcggtcatacaggcacacttgacccaaac
gcaacgggtgtgttgcccatacttctcggcaatgccacaaaagcgcaggatatagtgccg
aatcacgataaatcatataccgcaaaattccgcctcggaatgacaaccgataccctcgat
atatggggtgccgtaacatcacaaagcgataaaaccgcaaccgaggcagatgttttatcg
gcacttgaaaatttcagaggtgaaatcgagcagatgccgccgatgtactcggcaatcaag
gtaaacggtcaaagactttacgaccttgcaagacagggaaaagaagttgaacgaaagccg
agaaaagttacggtttacagacttgaacttaaagattttgacgaagaaagccaaagcgga
acattgaatataagctgttccaagggaacatatatccgaacaataattgacgatttaggt
aaaattctcaaaacgggtgcagtaatgactgctttgtgcaggacggctgcgtgcggctat
aaccttgctgacagcattacgcttgaaactgcaagagaattagccgaaaagggagaaatt
tcagagcatattatgcgcacggaaactctttttgcaagttaccgcaaaatatatgtgtct
gacgcacaggcaaaacgcttttcaaacggcggtgaacttgatatgttaagaaccgcactt
gcaaaagcaaaagcgcaagataaggaaataatcagagtaagcgacagacagggaaaattt
ttaggtcttggcattgccgataacgaaagcggtcagttgaaaattcttaaattgtttttg
aactga

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