Ruminococcus sp. FMB-CY1: LCN94_03440
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Entry
LCN94_03440 CDS
T10118
Name
(GenBank) starch-binding protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc00500
Starch and sucrose metabolism
ruc01100
Metabolic pathways
ruc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LCN94_03440
Enzymes [BR:
ruc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
LCN94_03440
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
CBM26
Alpha-amylase
Bac_A_amyl_C
DUF4232
Cadherin-like
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WBX58169
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Position
680270..682309
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AA seq
679 aa
AA seq
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MKDGDYLFKRILSGLLVSAMLTGSVVYLTGCSNSQNGSDDNTSTNTSTEYAHADKIDNGT
ILQCFSWDFNTIKESMADIAASGYTALQTSPINACLEGENGGMQLYGDGKWYYHYQPTDF
KIGNYQLGTRDEFKAMCDEAEKYGIKVIVDVIANHTTPTTSAVSQDLIDAGGGSLDTLYH
KNNAYDLNDFSNRLACTTYKMGGLPDINTERTSFQDYFIEYLNDCVACGADGFRYDTAKH
IGLPDDPKEDDGFTNNFWQRVITEVNNADNLFIYGEVLQGNNERIADYIEAIGHTTASTY
GSKIRGAITNNTLSKGTVSDYWLGDAPLNMVTWVESHDNYINDGNWYNMTKEQVILGWAV
ITARKDGTPLFFDRPYNSSVDNEWGMNRIGTEGDDMYKDKSVKAVNFFRTAMIGEDENIV
NPNSDSTAVMIERGTKGAVIVNTKDALKTGFETNLADGTYVNRVDGKTEYTVKNGKLTSD
ADIPANSVVVLYNDGYKKYEAAAEVGVAEDTVFNIQSGKTATVTLTCANTDNAEYALNGA
AAVSYKNGETVTVSVPSGSDIATLELTAKNSKGVKTYERVVFATEVKYSISSGTKVYFEK
PDSWGDQIFAYVYNDELYENETWPGIEMTKESDGKYSYTFTEDWETPYIIFNDGDEDGSQ
QYPADKGLIVEDGKTYTIN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatggtgattatttgtttaaaagaatattatcaggtctgttggtttctgctatg
ctcacaggttctgtcgtttatttgacaggctgttcaaattcgcagaacggttcagatgat
aatacttctaccaatacttctaccgagtatgctcacgcagataagattgataacggtaca
attttgcagtgtttttcgtgggatttcaatactataaaggaatctatggctgacattgcg
gcttcaggatatacggcgctgcagacttcgcctattaatgcttgccttgagggcgagaac
ggcggaatgcagctttacggtgatggcaaatggtactatcattatcagcccaccgatttt
aaaatcggtaactatcagctcggaactcgtgacgagtttaaagctatgtgtgacgaggcg
gaaaagtacggtattaaggttattgttgatgttattgctaaccacacaacaccgaccaca
agcgcagtaagtcaggatcttattgatgcaggcggcggaagtttggacacgctttatcat
aaaaacaatgcgtatgacctcaatgacttttcaaacagacttgcttgcactacttacaaa
atgggtggtttgcctgatattaatacagagcgcacatcttttcaggattattttattgag
tatctcaatgactgtgtcgcttgcggtgctgacggtttccgttatgatactgcaaagcac
atcggcttacctgacgatcctaaggaagatgacggctttacaaataacttctggcagaga
gtaatcaccgaagtaaacaatgctgacaatctgtttatatacggagaggtgcttcagggc
aacaatgaaagaattgccgactatattgaggcaataggtcatactacagcaagtacatac
ggcagtaaaatcagaggcgcaattacaaacaatactttgtcaaaaggtactgtaagtgat
tattggctcggtgacgcaccgcttaatatggttacatgggttgaatctcacgataactat
attaatgacggcaactggtacaatatgactaaggaacaggttatcctcggttgggcagta
attactgcaagaaaagacggcacaccgctgttctttgaccgtccttataactcaagcgtt
gataacgaatggggaatgaaccgtatcggcacagagggtgacgatatgtacaaggataag
agtgtaaaagccgtaaatttcttccgtacagctatgattggcgaagacgaaaatattgta
aatccgaactccgattcaaccgctgttatgattgaaagaggcacaaaaggagcggtaatt
gtaaatacaaaagacgctcttaagacaggatttgaaacaaatcttgccgacggtacatat
gtaaacagagttgacggcaagacagaatacaccgttaaaaacggtaaacttacttctgat
gccgatattccggcaaacagtgtggtagttctttataacgacggttataagaaatatgaa
gctgccgccgaagtaggcgttgccgaggacaccgtatttaatattcaaagcggtaaaacc
gcaacagtcacacttacttgtgcaaatacggataatgcggaatatgctcttaacggagca
gcggctgtttcatataagaacggagaaaccgtaaccgtttctgtaccgagcggaagtgat
atagcaacacttgaacttacagctaaaaattccaagggtgtaaaaacctacgaaagagtt
gtatttgctacagaagtaaaatattcaatttcaagcggcacaaaggtatattttgaaaag
cccgacagctggggcgatcagatttttgcatatgtttacaacgatgaactgtatgaaaac
gaaacctggccgggaattgaaatgacaaaggaaagcgacggaaagtacagctataccttt
acagaagattgggaaacaccgtatattatttttaatgacggtgacgaagacggttctcag
caatatccggcagataagggacttattgttgaggacggaaaaacttatactataaactga
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