Ruminococcus sp. FMB-CY1: LCN94_03610
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Entry
LCN94_03610 CDS
T10118
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc02024
Quorum sensing
ruc03060
Protein export
ruc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LCN94_03610 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LCN94_03610 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCN94_03610 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ruc02044
]
LCN94_03610 (ffh)
Enzymes [BR:
ruc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LCN94_03610 (ffh)
Secretion system [BR:
ruc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LCN94_03610 (ffh)
Eukaryotic Sec-SRP protein
LCN94_03610 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_17
AAA_33
ArsA_ATPase
nSTAND3
APS_kinase
Zeta_toxin
cobW
Sec8_N
AAA_24
ABC_tran
AAA_18
AAA_31
SPOUT_MTase
MMR_HSR1
AAA_15
ParA
KTI12
NACHT
AAA
Orthopox_F7
NPHP3_N
Thymidylate_kin
COMP
Motif
Other DBs
NCBI-ProteinID:
WBX58203
LinkDB
All DBs
Position
complement(719235..720611)
Genome browser
AA seq
458 aa
AA seq
DB search
MAFEGLSEKLSNAFKKLKNKGKLSENDVKEAMREVRLALLEADVNYKVAKELTAKITERA
VGQDVMESLTPGQMVVKIVNEELTELMGGDNARIEFASKPPTVIMLCGLQGSGKTTHAAK
LALMLKNQNHRPLLVACDIYRPAAIDQLKVVGAKAGVPVFEKGTQNPVKTAKEAIRNAKD
YGNDVVILDTAGRLHIDEELMDELKNVKAEVEPNEILLVIDSMTGQDAVNVAKSFNEKLE
ISGVILTKLDGDTRGGAALSVKAVTGKPIKFAGTGEKLEDIEVFHPDRMASRILGMGDVL
TLIEDAQNKIDQDKAEEMAKKMMSNKFDFNDLNDQFAQIKKMGPLKGILAKIPGIANQLD
NINIDDRQIDWTQAIILSMTPEERSNPSLLNPSRKRRIAAGSGRSVEEVNRLIKQLEQMQ
KMMKQLKNKTKGTKGGKKRKMKKLPGLGGMPMSNLPKN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaaggactttcagaaaagctaagtaatgcttttaaaaaattaaagaataaa
ggtaagctttcagagaacgatgttaaggaagctatgcgagaagtcagacttgctttgctc
gaggctgatgtaaactacaaagtagctaaagaacttaccgcaaaaatcacagaaagagcc
gttggtcaggatgtaatggaaagccttactccgggacagatggttgtaaaaatcgtaaat
gaagaacttaccgaacttatgggcggcgacaatgcaagaattgaatttgcgtcaaaaccg
cctacagttattatgctctgcggtttgcagggttcaggtaaaactacccacgcagccaaa
cttgctcttatgcttaaaaatcaaaatcacagacctttgctcgttgcctgcgatatatac
agacctgcagctattgaccagttaaaggtagtaggtgcaaaagcaggtgtgcctgtattt
gaaaaaggtactcaaaatcctgtaaagacagccaaagaggcaatcagaaacgccaaagac
tacggcaatgatgttgttattcttgataccgcaggtcgtttgcacattgacgaagagctt
atggatgagcttaaaaatgtaaaggctgaagttgagcctaacgagattttactcgttatc
gactcaatgacaggtcaggatgcggttaatgttgcaaaatcatttaacgaaaagcttgag
atttcaggtgtaattcttacaaaactcgacggtgatacccgtggcggtgcagcactttcg
gtaaaggccgtaacaggcaagcctattaaatttgcaggtacgggcgaaaaacttgaagat
attgaagtattccatcctgatcgtatggcaagccgtattctcggtatgggtgatgttctt
acccttattgaagacgctcaaaacaagattgatcaggacaaagccgaagaaatggctaaa
aagatgatgagcaataagtttgatttcaatgatcttaacgatcagtttgctcaaatcaaa
aagatgggtcctttaaaaggtattttggcaaaaatccccggcattgcaaatcagcttgac
aacataaatattgatgacagacagattgactggacacaggctatcatactttcgatgaca
cctgaagaaagatcaaatccttccctgctcaatccttcaagaaaaagaagaattgcagcc
ggttcaggcagaagtgttgaagaagtcaacagacttatcaaacagcttgagcaaatgcaa
aagatgatgaaacaacttaaaaacaaaacaaaaggcactaagggcggtaaaaaaagaaaa
atgaaaaagctcccgggtcttggcggaatgcctatgagcaatcttccaaaaaactaa
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