Ruminococcus sp. FMB-CY1: LCN94_03785
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Entry
LCN94_03785 CDS
T10118
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
ruc Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LCN94_03785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
S1_RRP5
YqgF
HHH_7
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
WBX58236
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Position
753593..755740
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AA seq
715 aa
AA seq
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MDYSKVLSQQFQIKEEYANNIISLLDDGNTIPFIARYRKEMHGSMDDQLIREFSEKLEYL
RSLDKRREEIRTLIDGQEKLTDEISLALDKAETLSELEDIYRPYRPKRKTRASVAKEKGL
EPLAEIILKQESKCDPVAVAEEYVDEEKGVANVEDALQGAMDIIAETVSDNAEIRKRIRN
LANVNGVISSVAVDAEKDSVYRQYYDYKEPVKKIADHRLLAVNRGEKEGFLKVSVEMDTE
RPLNSIAKVMITNPACACADIVKTACEDAYTRLIFPSIEREIRNDLTENACENSMKVFGV
NLRQLLMQPPVKGKTVLGLDPGYRTGCKVAVVDGTGKVLDTAVIYPTHSEVKVRESKQKL
LQLIKKHNVDIISIGNGTASKETEMFAADAIKEADHPVYYMVVSEAGASVYSASKLAAKE
LPQLDLTLRSAVSIARRLQDPLAELVKIEPKAIGVGQYQHDMPQKRLGETLDGVVEGCVN
SVGADLNTASPALLSRISGLNSTVCNNIVAYREENGAFTSRAELKKVPKLGPKAFEQCAG
FLRVPESKNPLDNTGVHPESYKSAKELLALLDYSDKEIKEGKFTDLANRVAAKGTKSLAD
TLKIGLPTLDDIVKELSKPGRDPRDELPAPMLRSDILDIKDLKPDMVLKGTVRNVIDFGA
FIDIGVHQDGLVHISQICDKYIKHPSEVLKVGDVVDVKIISVDPEKNRISLTMRF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggactattcaaaagtattatcacaacagtttcaaattaaagaagagtatgcaaataac
ataatttctttgcttgatgacggcaatacaattccgtttattgcccgctatcgtaaagaa
atgcacggctcaatggacgaccagcttattcgtgaattcagcgaaaaacttgagtatctg
cgttctcttgataaaaggagagaggaaattcgcacccttattgacggtcaggaaaaactt
accgatgaaataagtcttgcgcttgacaaggcggaaactctaagcgagcttgaagatatt
tacagaccttatcgaccaaagagaaagacaagagcctctgtggctaaggaaaaaggactt
gagccgcttgccgaaattatccttaagcaggagagcaaatgtgaccctgttgctgtggca
gaggagtatgttgatgaggaaaaaggcgtagcaaatgttgaagatgcattgcaaggcgca
atggatattattgcggaaacggtttcggataatgcggaaatcagaaagcgcataagaaac
cttgcgaatgtgaacggtgtaatttcttccgttgccgtagatgcagaaaaggacagcgtt
tacagacagtattacgactacaaagagcctgttaaaaagattgccgaccaccgtttgctt
gctgtaaacaggggcgagaaagagggctttttaaaagtcagcgttgaaatggataccgaa
agaccgcttaattccattgcaaaggttatgattaccaatcctgcctgtgcgtgtgcagac
attgtaaaaaccgcttgcgaggatgcatacacaagacttattttcccgtctattgagcga
gaaatcagaaatgatttaacggaaaatgcctgcgaaaattcaatgaaagtttttggtgta
aatcttcgtcaactgcttatgcagccgcctgttaagggcaaaactgtactcggacttgac
ccgggctaccgtacaggctgtaaagtagcggttgttgacggcacgggaaaggtactcgac
acagcggtaatttatcctacacattcagaggtaaaggtcagagagtcaaagcaaaaactt
ttgcagcttattaaaaagcacaatgtagatattatttcaatcggcaacggcacagcaagt
aaggaaaccgaaatgtttgcggcagatgcaatcaaagaggctgaccaccccgtttattat
atggtagtcagcgaggcaggcgcttcggtttattcggcatcaaaacttgcggcaaaggaa
ttaccgcagcttgaccttacactcagaagtgcggtttccattgcaagaagattacaagac
ccgcttgcagagcttgtaaaaattgaaccaaaggcaatcggagtcggacagtatcagcac
gatatgccgcagaaaagacttggcgaaacacttgacggtgtggttgagggttgcgtaaac
tctgtaggcgccgaccttaacacagcatctcctgcattgctttcaagaatttcaggtctt
aacagtacggtttgcaataatattgttgcttatcgtgaggaaaacggtgcatttacttct
cgtgccgaattaaagaaagttccaaagctcggaccaaaggcttttgagcagtgcgcaggc
tttttaagagtacctgaaagcaaaaatccactcgacaacacaggtgttcaccctgaaagt
tataagagtgcgaaagagttgcttgcacttcttgattattcggataaagaaattaaagag
ggtaaatttaccgatttggcaaacagagttgcggcaaagggaactaaaagccttgccgat
acacttaaaatcggtttgcctactcttgacgatattgtaaaggagctttcaaagccaggc
agagatccccgtgacgaactgcctgcaccaatgctccgttccgacattctcgacatcaaa
gacttaaagcctgatatggtactcaagggaactgtcagaaatgtaattgacttcggtgca
tttatcgacatcggtgttcatcaggacggacttgttcatatctcgcagatttgcgataag
tacattaagcacccgtcggaggttctcaaggttggcgatgtggtagatgtaaaaatcata
agcgttgaccccgaaaagaacagaatcagccttacaatgagattttaa
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