Ruminococcus sp. FMB-CY1: LCN94_04065
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Entry
LCN94_04065 CDS
T10118
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc00900
Terpenoid backbone biosynthesis
ruc01100
Metabolic pathways
ruc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LCN94_04065
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ruc01006
]
LCN94_04065
Enzymes [BR:
ruc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LCN94_04065
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LCN94_04065
2.5.1.29 geranylgeranyl diphosphate synthase
LCN94_04065
Prenyltransferases [BR:
ruc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LCN94_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WBX58289
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All DBs
Position
808460..809332
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AA seq
290 aa
AA seq
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MTDYIKQTEQALYDYLPDLNCREKELIESMKYSLEAGGKRVRPNLVFSFNELCNGKTEAA
VPFACAVEMIHTYSLIHDDLPCMDNDDMRRGKPSNHKVYGEDIALLAGDALQSLAFEIMT
SDKAISQSSAAACCKAVNTLAAYCGARGMVGGQVIDLINENKSAPIEVLREMDYKKTACL
IKAACELGCISANADDKLIKSASKYGECIGIAFQIQDDILDVTSTDEELGKPVGSDNENA
KSTYVSLLGIEKCRELVAELTDKAKTALNAFDGDTTALCDFADYLASRKK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgactgattatataaaacaaaccgaacaggctctttatgattatttgcctgacttaaat
tgcagagaaaaagaacttatcgagtctatgaaatacagccttgaggcaggcggaaaaaga
gtaagacctaatcttgtattcagttttaacgaactttgcaatggcaagaccgaggctgcg
gtaccttttgcttgtgcggttgagatgatacacacatattcgcttattcacgatgatctg
ccttgtatggataatgacgatatgcgcagaggcaaaccgtcaaatcataaggtgtacggt
gaagatattgctttgcttgcgggagatgcattgcagtcgctcgcttttgaaattatgaca
agcgacaaggcaatcagccaaagctcggctgctgcgtgttgtaaagctgtaaataccctt
gcggcttattgcggtgcaagaggtatggtcggcggtcaggttattgaccttattaatgaa
aataaatcagcaccgattgaagtgttgagagaaatggattataaaaaaacagcttgtctt
ataaaggcggcttgtgagcttggatgtatttctgcgaatgctgatgataaacttataaaa
tcagcatctaaatacggcgagtgtataggtattgctttccagatccaggacgatattctt
gatgttacttccactgacgaagaactcggaaaacctgtaggcagtgacaacgaaaacgct
aagtcaacatatgtgtcgcttctcggtatagaaaagtgcagagaacttgttgctgaactt
acagataaggcaaaaacggctcttaatgcttttgacggtgatacaacggctttgtgcgat
tttgcggattaccttgcaagccgtaaaaaataa
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