Ruminococcus sp. FMB-CY1: LCN94_04300
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Entry
LCN94_04300 CDS
T10118
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCN94_04300 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ruc03019
]
LCN94_04300 (groL)
03110 Chaperones and folding catalysts [BR:
ruc03110
]
LCN94_04300 (groL)
03029 Mitochondrial biogenesis [BR:
ruc03029
]
LCN94_04300 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ruc04147
]
LCN94_04300 (groL)
Enzymes [BR:
ruc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LCN94_04300 (groL)
Messenger RNA biogenesis [BR:
ruc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCN94_04300 (groL)
Chaperones and folding catalysts [BR:
ruc03110
]
Heat shock proteins
HSP60 / Chaperonin
LCN94_04300 (groL)
Mitochondrial biogenesis [BR:
ruc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LCN94_04300 (groL)
Exosome [BR:
ruc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LCN94_04300 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LCN94_04300 (groL)
Exosomal proteins of breast cancer cells
LCN94_04300 (groL)
Exosomal proteins of colorectal cancer cells
LCN94_04300 (groL)
Exosomal proteins of bladder cancer cells
LCN94_04300 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WBX58335
LinkDB
All DBs
Position
complement(853156..854784)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKQIAYGEEARKSLMRGIDQLADTVKITLGPKGRNVVLDKKYGAPLITNDGVTIAKEIE
LDDPFENMGAQLVKEVSIKTNDVAGDGTTTATLLAQALIREGMKNVTAGANPMVLKKGIA
DAINVAVKAVSDNSKQVSGSDDIARVATVSSQDEFIGKLIAEAMEKVTTDGVITVEESKT
AETYSEVVEGMMFDRGYIAPYMVTDTDKMVAELDNPYILITDKKISNTQEILPILEQIVQ
SGRKLLIIAEDVEGEALTTLVLNKLRGTFTCVAVKAPGFGDRRKEMLQDIATLTGGTVIT
SDLGLELKDTTMDQLGTARQVKVEKENTIIVDGAGDKDAIKGRVAQIRQQIETTTSDFDR
EKLQERLAKLAGGVAVIKVGAATEVEMKEKKLRIEDALAATKAAVEEGIVAGGGIACMNA
IPAVSAFVDTLEGDAKTGAKIVLKALEEPLRQIAANAGLEGSVICENIKKANKVGYGFNA
LTEEYTDMIEAGIVDPTKVTRSALQNASSVAAMVLTTESLVADIKEPAAPAAPAAPDMGG
MY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaattgcttatggtgaagaagcaagaaaatctcttatgagaggtattgac
cagcttgctgatacagttaaaatcacactcggtcctaagggcagaaatgttgtacttgac
aaaaagtacggcgctccgctcatcacaaacgacggtgtaacaattgctaaggaaattgag
cttgacgacccattcgagaatatgggcgcacagcttgttaaggaagtttcaatcaaaaca
aacgatgttgcaggtgacggtactacaacagctacacttcttgctcaggctcttatcaga
gagggtatgaagaatgtaacagcaggcgcaaacccaatggttcttaagaaaggtattgca
gacgctatcaatgttgcggtaaaggctgtttctgacaacagcaagcaggtttcgggttct
gacgatattgcaagagttgctacagtttcttcacaggatgagttcatcggtaagctcatt
gccgaggctatggaaaaggttacaacagacggtgttatcacagttgaagagtcaaagaca
gccgaaacttacagcgaagttgtagaaggtatgatgtttgaccgtggttacatcgctcct
tatatggtaacagatacagacaagatggttgcagaacttgacaacccatacattcttatt
acagataagaagatttcaaatacacaggaaattctcccgattcttgagcagattgttcag
tcaggcagaaaactccttatcattgccgaagatgtagagggcgaagctcttacaactctc
gtactcaacaagttaagaggtacatttacttgtgttgctgttaaggcaccgggctttggc
gacagaagaaaagaaatgttacaggatatcgcaacacttacaggcggtacagtaattaca
tcagacttaggtcttgagcttaaagatacaacaatggatcagcttggtactgctcgtcag
gtaaaggttgagaaagagaacacaatcattgttgacggtgcaggcgacaaggacgctatt
aagggcagagttgcacagattcgtcagcagattgaaacaacaacatctgattttgaccgt
gaaaaacttcaggagcgtcttgctaaactcgcaggcggcgttgcagtaatcaaagtcggt
gctgctaccgaagttgaaatgaaagaaaagaaactcagaatcgaagatgctcttgccgct
actaaggctgctgttgaagagggtatcgtagcaggcggcggtatcgcttgtatgaacgct
attccagctgtttccgcttttgttgatacacttgagggtgatgctaagacaggtgctaag
attgttcttaaagctcttgaagagccgctccgtcagattgccgcaaatgcaggtcttgag
ggtagcgtaatctgcgaaaacatcaagaaagctaacaaggttggttacggctttaacgct
cttacagaggaatacacagatatgattgaggcaggtatcgttgacccgacaaaggttacc
cgttctgctctccagaacgcatcttctgttgctgcaatggtactcacaacagagtcactc
gttgcagatattaaagagcctgcagctcctgctgctcctgctgctcctgatatgggcggt
atgtactaa
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