Ruminococcus sp. FMB-CY1: LCN94_05295
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Entry
LCN94_05295 CDS
T10118
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ruc Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruc03400
]
LCN94_05295 (radA)
DNA repair and recombination proteins [BR:
ruc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LCN94_05295 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA
DUF7125
NTPase_1
AAA_16
RecA_N
nSTAND_NTPase5
AAA_14
AAA_22
SLFN-g3_helicase
ABC_tran
GvpD_P-loop
nSTAND3
KdpD
AAA_5
MqsA_antitoxin
AAA_19
DUF7129
TIP49
GvpD_bR2
MCM
Zn_ribbon_RPB9
AAA_24
Rad51
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-ProteinID:
WBX58524
LinkDB
All DBs
Position
complement(1041568..1042932)
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AA seq
454 aa
AA seq
DB search
MAKIKSVYICSQCGYESPKWYGKCPTCGEWNTMEEEIKESVKAAPAVKRKVASAVSSPYS
ITEITTENEHRYDTGCGELNRVLGGGIVKGSLILLGGDPGIGKSTVLLQICQYLGNSMKV
LYVSGEESQRQLKLRANRLGVNSPNLFVMTETDVEVVCEQIRAEKPDIVMIDSIQTMNLT
ELSSSPGSVTQVRESTNCLMRTAKSLDIPMFVVGHVNKEGSIAGPKVLEHIVDTVLHFEG
DKQMSCRILRAVKNRYGSTNEIGVFEMTDTGLVEVPNPSVMLLSGRPKGVSGTCVTCTIE
GSRPILAEVQGLATQSGYGNARRMATGFDYNRLSLLLAVLEKRAGYYFSNNDAYINIVGG
LRIDEPAIDLAVAMALISSLKDVPIDENVVVFGEIGLAGEIRAVSQAQLRVNEAVRLGFT
KIILPYHNLKAVKCDGAELIGVKNIRQAFEAVSI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattaaaagtgtatatatatgctcgcagtgcggctacgaatcaccgaaatgg
tacggaaaatgtccgacctgcggcgaatggaacacaatggaagaagaaatcaaagaaagc
gtgaaagctgcgcctgccgtaaaaagaaaggtagcttctgcggtttcttctccttattca
attacggaaatcaccacagaaaacgagcaccgctacgatacgggctgcggcgaacttaac
cgtgtgcttggcggcggcattgtaaagggcagtcttattttgctcggaggtgatccgggt
atcggcaaatcaaccgtgttactgcaaatctgtcaatatctcggcaactcaatgaaagtg
ctttatgtgtctggcgaagaatcgcaaagacagcttaagttaagggcaaaccgactcggt
gtaaattctccgaatctttttgtaatgaccgaaaccgatgtagaagtagtgtgcgaacaa
atccgtgctgaaaagcccgatatagtaatgatcgactcaattcagacaatgaatcttaca
gaattaagctcctcaccgggcagtgtaacgcaggtcagagaatcgacaaactgccttatg
cgcacggcaaagtcgcttgatattccaatgtttgtggtaggtcatgtaaacaaagagggt
tccattgcgggtccgaaagtgcttgagcacatcgttgataccgtactgcactttgaaggt
gacaagcagatgtcatgcagaattttaagagcagtcaaaaacagatacggttctacaaac
gaaatcggcgtgtttgaaatgaccgacacgggacttgtggaagtgcccaatccgtctgta
atgttgctgtcgggcagaccgaaaggcgtatcgggtacttgcgtaacctgtacaattgag
ggttctcgtcctattcttgcggaagttcagggacttgcaacgcaaagcggctacggcaac
gctcgaagaatggcaacgggctttgactacaaccgactttcgcttttgcttgccgtgctt
gaaaaaagagcgggatattatttttcaaacaatgacgcttatataaacattgtcggcggt
cttagaattgacgaacctgccattgaccttgcggtcgcaatggcgcttatcagcagtctg
aaagatgttccgattgacgagaatgttgtagtgttcggcgaaatcggtcttgccggcgaa
atcagggcggtttctcaagctcaattaagagtaaacgaggctgtaaggcttggatttaca
aaaatcattcttccgtatcacaatctgaaagccgtaaaatgtgacggtgcagagcttatc
ggagttaaaaatataagacaggcctttgaggcagtcagcatatga
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