Ruminococcus sp. FMB-CY1: LCN94_05370
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Entry
LCN94_05370 CDS
T10118
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCN94_05370 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruc03400
]
LCN94_05370 (xth)
Enzymes [BR:
ruc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LCN94_05370 (xth)
DNA repair and recombination proteins [BR:
ruc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LCN94_05370 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF3089
Motif
Other DBs
NCBI-ProteinID:
WBX58538
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All DBs
Position
complement(1056692..1057447)
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AA seq
251 aa
AA seq
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MKKFISWNVNGLRACVTKGFLDFFNEVNADVFCLQETKLQAGQIDLQLDGYYMYWNYAEK
KGYSGTALFTKEEPISVTYGLGIEEHDKEGRVITAEFEDYYFVTCYTPNSKNELLRLDYR
MVWEDAFREYLKNLEKAKPVIVCGDLNVAHNEIDLKNPKTNRKNAGFTDEERGKMTALLD
SGFTDTFRYFYPDREGIYSWWSYRFKAREKNAGWRIDYFLTSKALDSRLVSADIHTEVFG
SDHCPVELVIE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttatatcttggaatgtaaacggtttaagagcctgcgtaacaaagggcttt
cttgacttttttaatgaagtaaatgcagatgtattttgcttgcaggaaactaagctgcag
gcaggacagattgacttgcagcttgacggctattatatgtattggaactacgccgaaaaa
aagggatactcgggcactgcgcttttcacaaaagaagagccgataagcgtaacctacggg
cttggaattgaagaacacgataaagagggcagagtgataaccgccgaatttgaggactat
tattttgtgacctgctatacgccaaattccaaaaacgagttattaagacttgattacaga
atggtttgggaggatgctttcagagaatatctgaaaaatcttgaaaaagcaaaacccgta
atcgtatgcggcgacctcaatgttgcgcataatgaaattgaccttaaaaatcctaagaca
aatcgcaaaaacgcaggctttacagatgaggaaagaggtaaaatgactgcgcttttagac
agcggatttaccgatactttccgctatttttatcccgacagagagggaatatactcgtgg
tggtcatacagatttaaagcgagagaaaagaatgcaggctggcgtattgactattttctc
acatcaaaagcccttgattcaagacttgtcagcgccgatattcacaccgaagttttcggc
agcgaccattgccctgttgaacttgtgattgaataa
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