Ruminococcus sp. FMB-CY1: LCN94_05925
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Entry
LCN94_05925 CDS
T10118
Name
(GenBank) hypothetical protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc00500
Starch and sucrose metabolism
ruc01100
Metabolic pathways
ruc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LCN94_05925
Enzymes [BR:
ruc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
LCN94_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM26
Dockerin_1
GspA_SrpA_N
Motif
Other DBs
NCBI-ProteinID:
WBX58640
LinkDB
All DBs
Position
complement(1171168..1174284)
Genome browser
AA seq
1038 aa
AA seq
DB search
MSKLKKLTSIVLAATIVSSASAMALTASAAENDNAVSAADNNLQRNVQDGVILHAFNWSY
KTIKENLPAIAAAGYSTVQTSPVQQPKDYSTSRDVTGQWWKLYQPVSLSVAKNAWFGTKD
ELKDLCTEAEKYGIKIICDIVSNHMGNESEDTPNVVSSQVKTYDPEIYDNASAFFRNNDI
VASDSSVKNVVQGHVTSCPDLNTNSKVVQDKVISLLKECIDCGVDGFRFDAAKHIETPDD
GDYASDYWKNITESAGSYYKAKTGDNLYIYGEILNNCGSGRSYSSYTKYINVTDNKTGDS
VLANVVKGKASNAANSSYKSGVDASDVVLWAESHDTYEGDSGAGGISNTSKVSDENITKA
WAIIAARKDATSLYFARPGASLMGEAAGDITYKSTAVSEINKFHNLFVGQSEKLGAVDNV
AYVARGTSGIVLANCDGNEKSVSISGTGLANGTYTDTVSGAKFTVANGVLTGNIGSTGVA
VVYNGTTTPRNTCSVESGDFKGDTLTLNLGLDNAASGTYCIDNSKPVTYTGDIAIRVGSD
YAYGETINLTLTATDGKNTTTTTYKYTKQKSASSGVYVFFASEKRETSSKWKAPYYVYIY
DEESSKEETYKASNWPGTKMNYDKATGYYYAEVPTTCIATDADENESESNFDLAHSANTR
VIFCDSSNVNSAPRQYPSEKGLKLKGTSRIFGLTKTTSWEETTLVPTVESQPATEVTRGD
KTYKYGDVNTDGKFNVQDVTSLQFIVAESVKPSQLIYALSDVTADGVVDIRDVTMIQRYI
SGIREDTGKTGEVYKAEQPTQPTQPAKPTEATKPSTQPTTAPAPSTYTLYLKTQLPWMTS
MGTNLYAFDNNTKKSYLLEQDTDDYPNVFKAEVANTLTSVTFYRALDMVDEMTKASSSGP
VYNAWAATVSSTNNCYNLESVDEATDKATATVGPYVKEEAPEWTLDVVYFDNSKTKWGEV
YIYGWGNGLYEEAYKMTQIEGTDIWKYELPEPIYPGTESFLFKNTESTWVKKTKNVKVVE
GKNLYDGKAQAWSGTYEE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacttaaaaagctgacaagcattgtgcttgcggcaactatcgtttcttctgca
tctgcaatggcattgaccgcatccgcagctgaaaatgataatgcggtttccgcagcggac
aataatctgcaaagaaatgttcaggacggcgtaattttacacgcttttaactggtcgtac
aaaacaattaaggaaaacctgcctgcaattgcagcagccggttattctacagttcagact
tcacctgttcagcagccgaaagactactcaacatcaagagatgttacaggtcagtggtgg
aaactttatcagcctgtaagcctttctgtagctaaaaacgcatggttcggtacaaaagac
gaactcaaagacctttgtacagaggctgaaaagtacggtataaaaattatttgcgacatt
gtttctaaccatatgggcaatgaaagcgaagatacacctaatgttgtaagctcacaggtt
aaaacatatgatcctgaaatttacgacaatgcaagtgctttcttccgtaacaacgatatt
gttgcatcagacagcagtgtaaaaaatgtagttcagggacatgttacttcctgccctgac
ctcaacacaaacagcaaagttgttcaggataaggttatctcactccttaaggaatgtatc
gactgcggtgttgacggtttccgttttgatgcggcaaaacacattgaaactcccgatgac
ggtgactatgcttctgattattggaagaacattacagagtctgcaggctcatattacaaa
gcaaaaacaggcgacaatctttatatttacggtgagattcttaacaactgcggttccggc
agaagttacagttcttacacaaagtacattaatgtaacagataacaaaacaggtgactct
gtactcgcaaatgtggtaaaaggcaaggcatcaaatgccgcaaactcaagctacaagtca
ggcgttgacgcttccgatgtagttctttgggcagagtcgcacgatacatacgagggcgat
tcgggtgcaggcggtatcagcaatacctctaaagtatctgacgaaaatatcactaaagca
tgggctatcatagccgcaagaaaagacgctacttctctttactttgcccgtccgggtgca
tcgttaatgggtgaggcagcaggcgatataacttataagagcacagctgtttctgaaatt
aataagttccataacctctttgttggtcagagtgaaaaactcggtgccgttgacaatgta
gcttatgttgcaagaggcacaagcggtattgttcttgctaactgcgacggcaacgaaaag
tctgtaagtatttcaggcacaggccttgcaaacggtacttacacagatacagtttcaggc
gctaaattcactgtagctaacggcgttcttacaggtaatatcggttcaacaggtgtagct
gttgtttacaacggcacaacaactccgagaaatacttgttctgtagagagcggtgatttc
aagggcgacacacttacactcaacctcggtcttgacaacgcagcatcaggtacatactgc
attgacaattctaagcctgtaacttacacaggtgacattgcaatcagagtaggttcagac
tacgcttacggcgaaacaatcaaccttactcttacagcaacagacggcaaaaatacaaca
accactacttacaaatataccaagcagaaatctgcaagttcaggtgtgtatgtattcttt
gcttctgaaaaaagagaaacaagctcaaaatggaaagctccttactatgtttacatctac
gacgaggaatcttcaaaggaagaaacttataaggcatcaaactggcctggtacaaagatg
aactatgataaggcaacaggttattactatgcagaagttcctacaacctgtattgcaaca
gatgcagatgaaaacgagtctgagtcaaattttgaccttgcacactctgcaaacacaaga
gttatcttctgcgacagctcaaatgtaaactctgctcctcgtcagtatccgtcggaaaaa
ggccttaaattaaaaggaacttctagaattttcggtcttacaaagacaacttcatgggaa
gaaacaacacttgtacctacagttgaatcacagcctgcaaccgaagttacaagaggcgac
aaaacatataaatacggcgatgtaaacacagacggaaaatttaatgttcaggatgtaacc
tcactccagtttattgttgcagagtccgtaaagccgtcacagcttatatatgcattgagc
gatgttacagctgacggtgttgtagatatcagagatgtaacaatgatccagagatatatt
tccggtattagagaggacacaggcaaaacaggcgaagtttataaggctgaacaacctaca
cagcctacacagcctgcaaaacctacagaggcaaccaagccttctacacagccgacaact
gctcccgcaccttctacttacacactttacttaaagacacagcttccttggatgacatca
atgggtacaaatctctatgcttttgataacaatacaaagaagtcttatctgcttgagcag
gataccgacgattatccgaatgtatttaaggcagaggtagcaaacacacttacaagtgtt
actttctacagagcattagatatggttgacgaaatgacaaaggcgtcaagttcaggccct
gtatacaacgcttgggcagcaactgtaagcagcacaaacaattgctacaaccttgaaagc
gttgatgaagcaacagacaaagcaactgcaacagtcggtccgtatgtaaaagaagaggct
cccgaatggacacttgatgtagtatattttgataattcaaaaacaaagtggggagaagtt
tatatttacggttggggcaacggtctttacgaagaggcatataaaatgactcaaattgag
ggcacagacatctggaaatacgaacttcccgaacctatttatccgggtacagaaagtttc
ctttttaagaatacagaaagcacttgggttaaaaagactaagaatgtaaaggttgtagaa
ggtaaaaatctttacgacggaaaagcacaggcttggtcaggcacttacgaagagtga
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