Ruminococcus sp. FMB-CY1: LCN94_06305
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Entry
LCN94_06305 CDS
T10118
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc00470
D-Amino acid metabolism
ruc00550
Peptidoglycan biosynthesis
ruc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LCN94_06305 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LCN94_06305 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ruc01011
]
LCN94_06305 (murD)
Enzymes [BR:
ruc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LCN94_06305 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ruc01011
]
Precursor biosynthesis
Amino acid ligase
LCN94_06305 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
WBX56554
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Position
complement(1247256..1248647)
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AA seq
463 aa
AA seq
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MNNLADKFFESIKGKKVGFIGIGTSNLPLIKLFSDKGAVVSAYDKKDFESLGENAVKAKE
YGAELVLGEDYLSKLDGDIIFRSPGTPFYRPELVALREKGVVLTSEMEVFFDLCPCKIIA
ITGSDGKTTTTTIISEFLKASGVNVHLGGNIGKPLLPEIESIKEDDVAVVELSSFQLISM
RKSPDVAVVTNLAPNHLDIHKDMQEYVDSKKNIVLHQNAFSKAVLNLDNEIANSFSDSVR
GQLAKFSVKESLANGAYLDGTTVCYSDYGKVTKIMDIKDIKIPGMHNVENYLAAISAVWG
MVDIETIKAVAKTFGGVEHRAEFVREYNGVKYYNDSIASSPTRTALGTLSLYDEKIIIIA
GGYDKHIPYEPLGPVINDKVKVLILLGDTAPKIEKAVVEAENYNENEITIINVTNMEEAV
EAAVNHAEKGDIVSLSPASASFGLYKNFEERGNHFKAIVNALR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttagcagataagttttttgaaagtataaagggtaaaaaagtcggttttatc
ggtatcggcacaagtaacttgcctttgataaaactgttttcggataaaggcgcagtagtt
tctgcatatgacaaaaaagattttgaatcactcggcgaaaatgctgtaaaagccaaagaa
tacggcgcagagcttgttttgggcgaggattacctctcaaaacttgacggcgacattatt
ttccgcagtccgggcacaccgttttacagacctgaacttgttgcattaagagaaaaaggc
gttgtactcacttccgagatggaagtgttctttgacctctgcccatgtaaaattattgca
attacaggttccgacggcaaaaccacaaccacaacaattatctccgaatttttgaaagca
agcggtgtgaatgtacacctcggcggcaacatcggcaagcctttactccctgaaatcgag
agcattaaagaggacgatgtggcagtggttgagctttcaagttttcagcttatttcaatg
agaaaaagtcctgatgttgcagtggttacaaaccttgcgcctaaccacctcgacatacat
aaggatatgcaggagtatgtggattcaaagaaaaacatcgtacttcaccagaatgctttt
tcaaaggcagtgcttaaccttgacaatgaaattgcaaattctttctctgacagcgttcgt
ggtcagcttgcaaaattcagtgtaaaagaaagccttgcaaacggcgcttatcttgacggt
acaactgtttgctacagcgactacggcaaggttacaaagattatggacattaaggatatt
aaaattccgggtatgcacaatgttgaaaactatcttgccgctatttccgctgtatgggga
atggttgatattgaaactattaaggctgttgcaaagactttcggcggtgttgaacacaga
gcggagtttgtaagggagtacaacggagttaagtattacaacgattccattgcatcaagc
cctacaagaacagcactcggcacgctctcgctctatgatgaaaaaatcatcatcattgca
ggcggttacgacaagcatattccttatgagccgctcggccctgtaatcaacgataaggtt
aaggttctcattcttctcggcgatactgctccgaagattgaaaaagccgttgttgaggct
gaaaactacaacgaaaatgaaattacaatcataaatgttacaaatatggaagaggcagtt
gaggctgccgtaaaccacgccgaaaaaggcgacattgtttcgctttctccggcaagcgca
agttttggtttgtacaagaattttgaggaaagaggaaatcatttcaaggctattgtaaac
gctttgagataa
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