Ruminococcus sp. FMB-CY1: LCN94_07000
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Entry
LCN94_07000 CDS
T10118
Name
(GenBank) TrpB-like pyridoxal phosphate-dependent enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc00260
Glycine, serine and threonine metabolism
ruc00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ruc01100
Metabolic pathways
ruc01110
Biosynthesis of secondary metabolites
ruc01230
Biosynthesis of amino acids
Module
ruc_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LCN94_07000
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LCN94_07000
Enzymes [BR:
ruc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LCN94_07000
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
WBX56682
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Position
1405639..1407018
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AA seq
459 aa
AA seq
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MENTKIPYKIYLDESEIPTQWYNVRADMKNKPAPLLNPATLKPMTAEELYPVFCKELVAQ
ELNDTDAYIDIPQEIQDFYKMYRPSPLIRAYFLEKALGTPAKIYYKFEGNNTSGSHKLNS
AIAQAYYAKKQGLKGVTTETGAGQWGTALSMACSYFGLDCKVYMVKVSYEQKPFRREVMR
TYGASVTPSPSTDTAVGRKILKEHPGTTGSLGCAISEAVEVATSTEGYRYVLGSVLNQVL
LHQSVIGLEAKKALDKYNVKPDIIIGCAGGGSNLGGLISPFVGEKLRGEADYRIIAVEPA
SCPSLTRGKFAYDFCDTGKVCPLSKMYTLGSGFIPSANHAGGLRYHGMSSTLSQLYHDGL
MEATSVEQTSVFAAAEQFARVEGILPAPESSHAIRVAIDEALKCKETGEEKTILFGLTGT
GYFDMLAYEKFNDGLMSDYIPTDEELQKGFDGLPNVPEN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacaaagattccatataaaatttatcttgacgaaagtgaaatacctactcaa
tggtataatgttcgtgcagatatgaaaaacaagcctgctcctcttcttaaccctgctaca
ttaaaaccaatgacagcagaggagctttatcctgttttctgtaaagaactcgtagcacag
gaacttaacgatacagacgcatacatagatattccgcaggaaattcaggatttctataaa
atgtaccgtccgtccccgcttatcagagcatatttccttgaaaaagctctcggtactcct
gctaagatttactataagtttgagggtaacaatacaagcggcagtcataaattaaactct
gccattgcacaggcttattatgctaaaaagcagggtcttaaaggcgttacaacagaaaca
ggcgcaggccagtggggtaccgccctttcaatggcttgttcttacttcggtcttgattgt
aaggtatatatggtaaaagtatcttacgaacaaaagccgttcagaagagaagttatgaga
acttacggtgcaagtgttactccttccccgtctacagatactgcagtcggcagaaaaatt
cttaaggagcacccgggcacaacaggcagtcttggctgtgcaatttccgaggctgtagaa
gttgcaacttctacagaaggataccgttatgtactcggcagtgtgctcaatcaggtactt
cttcaccagtcggttatcggtcttgaggctaaaaaagctcttgataaatacaatgttaag
cctgacatcattatcggttgtgccggcggcggttctaaccttggcggtcttatatctccg
ttcgtaggcgaaaaattaagaggtgaggctgattacagaattattgccgttgaacctgca
tcttgcccaagcttgacaagaggtaagtttgcatatgacttctgcgataccggcaaggtt
tgcccgctctctaagatgtacacactcggcagcggatttattccgtccgctaaccatgcc
ggcggacttcgttaccacggtatgagcagcacactttcacagctttaccacgatggtctt
atggaggctacttctgttgagcagacatctgtatttgctgccgcagaacaatttgcaaga
gttgagggtattctccctgctccggaaagcagccatgcaatcagagttgcaattgatgag
gctctcaaatgtaaagaaacaggcgaagaaaaaactattctctttggtcttacaggtaca
ggctacttcgatatgcttgcatatgagaagtttaacgacggtcttatgagcgactatatt
ccgacagacgaggaactccagaaaggctttgacggtcttccgaatgttccggagaactga
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