Ruminococcus sp. FMB-CY1: LCN94_07760
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Entry
LCN94_07760 CDS
T10118
Name
(GenBank) hypothetical protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ruc Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ruc01011
]
LCN94_07760
Enzymes [BR:
ruc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LCN94_07760
Peptidoglycan biosynthesis and degradation proteins [BR:
ruc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LCN94_07760
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Erp_C
DUF7287
GluR_Homer-bdg
Motif
Other DBs
NCBI-ProteinID:
WBX56820
LinkDB
All DBs
Position
1576687..1577388
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AA seq
233 aa
AA seq
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MRTKVIFIIIFLLTMAFLPIIISKCSSPQTAVTSNSTADKATEPVTANEPSKNETIVETT
TESVAKKNSESEKSPLTESDLCGMVAAKYNENYCEETLKALTIILYTNYNVSPDSYDLSD
IDICLPESKAENSVKENYNKIKSAVSSVYKKALCADGKAFYIPFCDFTNGKTSTNSEYPY
LTAVASPWDSYANADDGEYYGVSLNGINYLCNDGYSYEEALQWYLPNFKIQIL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaagttatatttataataatatttttgcttacaatggcttttttgcccata
ataatctctaagtgctcgtcgcctcaaaccgctgtcacttcaaattcgactgcggataaa
gcaacagagcccgttaccgcaaacgaaccgtcaaaaaacgaaaccatagttgaaactaca
accgaatctgtcgcaaaaaaaaattccgaatcagaaaaatcgccgctcaccgaatctgac
ctttgcggtatggtagcggcaaaatacaatgaaaattactgcgaagaaaccttaaaagca
ttaacaataattctttatacgaattataatgtatctcccgacagttacgatttgtcggat
attgacatatgtttgcccgaaagcaaagcagaaaattccgttaaagaaaattacaataaa
atcaaatccgccgtatcttccgtatataaaaaagcgctctgcgcagacggcaaagcgttt
tatatacctttttgcgattttaccaacggcaaaacttcaacaaacagcgaatatccgtac
cttaccgctgttgcctccccttgggacagctatgcaaatgccgatgacggggaatattac
ggtgtaagccttaacggaataaattatctttgtaatgacggatacagctacgaagaggct
ttacaatggtatctgccaaattttaaaattcagattctttag
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