Ruminococcus sp. FMB-CY1: LCN94_08535
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Entry
LCN94_08535 CDS
T10118
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ruc Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ruc03009
]
LCN94_08535 (der)
Ribosome biogenesis [BR:
ruc03009
]
Prokaryotic type
GTPases
LCN94_08535 (der)
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
Ras
MMR_HSR1_Xtn
ABC_tran
AAA_22
TniB
NTPase_1
SRPRB
NPHP3
PNK3P
Thioredoxin_8
Motif
Other DBs
NCBI-ProteinID:
WBX56957
LinkDB
All DBs
Position
complement(1738532..1739854)
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AA seq
440 aa
AA seq
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MNKPVIAIVGRPNVGKSTLFNKLIGQRLSIVDDTPGVTRDRIYGEVEWLGKKAFIIDTGG
IEPKSDDIILSQMRRQAQLAIDTANVIILVTDGKTGMVATDMDIAQMLMKSNKPIVLCVN
KCDGIGEPTPEFYEFYNLGLGDPIQVSSVHGHGTGDLLDNVFEHLDFTEDSEDDGTVINV
AVIGKPNAGKSSLINKITNEERCIVSDIAGTTRDTIDTMIENKYGKFNFTDTAGLRRQNK
IYDDIEKYSIIRAKMAIERSDVCVIMIDAEAGVTEQDTKVAGLAHEAGKACILAVNKWDA
IEKNDKTMQEFRKKLDTDFAFMSYAPKVFISAKTGQRIDRLFEFIVSCAEQSARRITTGM
LNELLAQATTRVQPPSDKGKRLKIFYVTQASVKPPTFIFFCNNAQLFHFSYQRYLENRIR
EAFGLEGTPIRIIIRERGEK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctgtaattgcgattgtaggcagaccgaatgtcggtaaatctacacttttt
aataaacttatcggtcaaagactttcaatagtcgatgatacaccgggtgttacccgtgac
cgtatttacggcgaggttgaatggctcggcaaaaaagcgtttataattgacacaggcggt
attgaaccgaaatccgacgatattattttgtcgcagatgcgcagacaggcacaacttgcc
attgataccgcaaatgtaattattcttgttacggacggcaaaacaggtatggttgccaca
gatatggatattgcgcagatgcttatgaaatcaaacaagccgattgtgctttgtgtaaat
aaatgtgacggaatcggcgaaccgactcctgaattttatgaattctataatctcggactc
ggagatcctattcaggtttcatctgttcacggacacggcacgggcgatttgcttgacaat
gtgtttgaacaccttgattttacagaggacagcgaggatgacggcacagtaattaatgtg
gctgttataggcaagccaaatgcaggtaaatcatcgctcattaataaaattacaaacgag
gagcgctgcatagtttctgacattgcgggtactacaagagataccattgacacaatgatt
gaaaataagtacggtaaatttaactttaccgatacagcaggacttcgtcgtcagaataaa
atttatgatgatattgaaaagtacagtattatcagagcaaagatggctattgaacgcagt
gatgtatgcgttattatgattgacgcagaggcaggcgttaccgagcaggatacaaaggta
gcaggacttgctcacgaggcaggcaaggcttgtattcttgctgtaaataaatgggatgca
attgagaaaaacgacaagacaatgcaggagttcaggaaaaaacttgatacagactttgca
tttatgtcttatgctcctaaggtatttatttctgcaaagacaggtcagcgtattgacagg
ttgtttgaatttattgtaagctgtgcggagcagtctgcaagaagaattacaacaggtatg
ctcaatgaattgcttgcacaggctacaacaagagttcagccgccgtcggataaaggcaag
agattaaagattttttatgttacccaggcatcggttaagccgccgacatttattttcttc
tgtaataacgctcaattattccacttttcttatcagcgctatcttgaaaacagaatcaga
gaggcattcggacttgagggcacaccaatcagaattattatcagggagcgtggcgaaaag
taa
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