Ruminococcus sp. FMB-CY1: LCN94_09790
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Entry
LCN94_09790 CDS
T10118
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc00260
Glycine, serine and threonine metabolism
ruc00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ruc01100
Metabolic pathways
ruc01110
Biosynthesis of secondary metabolites
ruc01230
Biosynthesis of amino acids
Module
ruc_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LCN94_09790 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LCN94_09790 (trpB)
Enzymes [BR:
ruc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LCN94_09790 (trpB)
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Motif
Pfam:
PALP
DUF488
Motif
Other DBs
NCBI-ProteinID:
WBX57187
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All DBs
Position
complement(1994717..1995901)
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AA seq
394 aa
AA seq
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MSKGKFGIHGGQFVPETLMNAVNEFEEAYEKYKNDPEFVAELDTLMREYAGRPSLLYYAE
KMTKDLGGAKIYLKREDLNHTGSHKLNNCLGQCLLAKKMGKTRVIAETGAGQHGVATATV
AALMGLECEIFMGKEDTIRQALNVYRMKLLGAKVNAVETGTMTLKDAVNEAMREWTNRVD
DTHYVLGSVMGPHPFPMVVRDFQSVIGKEIKAQLLEKEGRLPDVVMACVGGGSNAMGAFY
DFIGDESVQLIGCEAAGLGVDNPKNAATIANGTLGIFHGMKSYFCQDKYGQIAPVYSISA
GLDYPGIGPEHANLSDTGRAKYVPVTDEEAVSAFEYLSRTEGIIPAIESAHAVAHCIKLA
PTMSKDSIIVVNLSGRGDKDVAAIARYRGENIYE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagggtaagtttggtattcacggtggacagtttgttcccgaaactttaatgaat
gccgttaatgaatttgaagaagcatatgaaaaatataaaaacgatccggagtttgtcgca
gagcttgacacacttatgcgtgagtatgccggcagaccgtcacttctctattatgcggag
aaaatgacaaaggatttaggcggtgctaagatttatttaaagcgtgaggacttaaatcat
acgggttcacacaaactcaataactgtcttggtcagtgcttgcttgccaaaaagatgggc
aaaacaagagtaattgcagaaacaggcgcaggtcagcacggtgttgcaacagcaactgtt
gccgcacttatgggacttgagtgtgagatttttatgggcaaagaggatacaatccgtcag
gctcttaatgtatacagaatgaaacttctcggcgcaaaggtaaatgccgttgaaacaggc
acaatgactcttaaagacgccgtaaacgaggctatgcgtgagtggactaacagagttgac
gatactcactatgtactcggttcggtaatgggcccgcatccgttcccaatggttgtaaga
gatttccagagcgtaatcggtaaggaaatcaaagcacagctccttgaaaaagagggcaga
cttcctgatgtggttatggcttgcgttggcggcggcagtaatgctatgggcgcattttat
gactttatcggtgatgagagcgtacagcttatcggttgtgaggcagcgggtcttggcgtt
gataatccgaagaatgccgcaacaatcgcaaacggtacactcggtattttccatggtatg
aaatcatatttctgtcaggataagtacggtcagattgcacctgtatactcaatttcagca
ggtcttgattacccgggtatcggtcctgaacatgctaacttaagcgatacaggcagagca
aaatatgtgcctgttaccgatgaagaggcagtaagcgcatttgagtatctttcacgcaca
gagggtattatacctgctattgagagcgcacacgctgttgcacactgcattaaacttgct
cctacaatgagcaaagacagcattattgttgtaaatctttcgggcagaggcgataaggat
gttgccgctattgcaagatacagaggggagaatatttatgagtaa
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