Ruminococcus sp. FMB-CY1: LCN94_10260
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Entry
LCN94_10260 CDS
T10118
Symbol
spoIIID
Name
(GenBank) sporulation transcriptional regulator SpoIIID
KO
K06283
putative DeoR family transcriptional regulator, stage III sporulation protein D
Organism
ruc Ruminococcus sp. FMB-CY1
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ruc03000
]
LCN94_10260 (spoIIID)
Transcription factors [BR:
ruc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LCN94_10260 (spoIIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIID
HTH_psq
HTH_23
HTH_28
HTH_10
DUF134
HTH_50
HTH_11
HTH_DeoR
NUMOD1
HTH_7
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WBX57279
LinkDB
All DBs
Position
complement(2076315..2076611)
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AA seq
98 aa
AA seq
DB search
MKGIVEERAAMLGEYIIESKATVRKAAKKFGISKSTVHKDVSQRLRKVNPALYREVRQIL
ETNKSERHIRGGMATKNKYLLKKQAQEREKLKNSEQNQ
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtatagttgaggaacgggcggcaatgctcggcgaatatataatagaaagcaag
gcaaccgtaagaaaagccgctaaaaaattcggaatttcaaagtcaacagtacataaagat
gtaagccaaagattaagaaaggtaaatcctgcattgtacagagaggtgcggcaaatactc
gaaaccaacaaaagcgaaagacatataagaggcggaatggcaacaaagaataaatattta
cttaaaaaacaggcacaggagagggaaaaattaaaaaatagtgaacaaaatcagtga
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