Ruminococcus sp. FMB-CY1: LCN94_10380
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Entry
LCN94_10380 CDS
T10118
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc03030
DNA replication
ruc03430
Mismatch repair
ruc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCN94_10380 (dnaX)
03430 Mismatch repair
LCN94_10380 (dnaX)
03440 Homologous recombination
LCN94_10380 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruc03032
]
LCN94_10380 (dnaX)
03400 DNA repair and recombination proteins [BR:
ruc03400
]
LCN94_10380 (dnaX)
Enzymes [BR:
ruc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCN94_10380 (dnaX)
DNA replication proteins [BR:
ruc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCN94_10380 (dnaX)
DNA repair and recombination proteins [BR:
ruc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCN94_10380 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
AAA_19
AAA_30
AAA_5
RuvB_N
TIP49
DNA_pol3_delta_C
AAA_14
AAA_24
AAA_16
AAA_assoc_2
AAA_7
Herpes_Helicase
Mg_chelatase
AAA_28
ATG17_like
AAA_18
Rad17
DUF815
nSTAND3
RNA_helicase
RCF1-5-like_lid
VapE-like_dom
PIF1
DNA_pol3_a_NII
TsaE
Motif
Other DBs
NCBI-ProteinID:
WBX57299
LinkDB
All DBs
Position
complement(2100462..2102141)
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AA seq
559 aa
AA seq
DB search
MYRVLYRKWRPAVFTDVSGQEHITSTLQNEVSSGRLNHAYLFTGSRGTGKTTCAKILAKA
VNCLNPQNGNPCGECEICKGIDDGSILDIVEMDAASNRKIDDIRQIIDEVQFKPAKCKYR
VYIVDEVHMLTTEAFNALLKTLEEPPEHVIFILATTEVHKLPQTIRSRCQRFDFHRIPPK
AIADRVEYVVSQENAEITESAALMLASVADGALRDALSLLDSCLAVSSHIDEEVVRNAAG
LVSKTYLFELAAAIINKNPTRSLEIIDRLYSESKDMARLCDELVEHFRALMLIKTIKNPR
DILIMSDDEFEQAVTQSDYLSLADIVFYMDVLSRAYQRMGRGTGDRTELEMALVKLSATE
LDGTVEALTARVTALEKAVKRGITVNYAQPAQQSVQAEAAQSASVPNTQTEVEEPFAKPE
PEHKKAPVAKPAPEVKSVAQRASVNLDELYDNAVPFARWVEVVDSLKSVSRSIAAAFAGS
TAYESGNYLLIDTNNELAFDLLRQNGRRAEIKQTLLELTGKNYSLGPYKRSTPKKVEKTD
PLNSLVQSLEGSGVEITQE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgtgtgctttaccgcaagtggcgacctgccgtgtttaccgatgtttcgggacag
gagcatattacctcgactttgcaaaacgaggtttcgtccggcagacttaaccacgcttac
ctctttacaggctcacgaggaacaggcaaaaccacctgcgcaaaaattcttgccaaggct
gtaaactgtcttaatccgcaaaacggcaatccttgcggcgaatgtgaaatctgcaagggt
attgatgacggaagtattcttgatattgtcgagatggacgccgcatctaaccgtaaaatt
gatgatattcgtcagataattgacgaggtacagtttaagcccgcaaagtgcaaatacagg
gtgtatattgtcgatgaggtacatatgcttaccacagaggcttttaacgctcttcttaaa
acgcttgaagaaccgcccgagcatgtaatttttatacttgccactaccgaggttcacaag
ctgccgcagacaatccgttcaagatgtcagcgatttgattttcacagaataccgcctaag
gcgatagcagacagagtagagtatgtggtttcgcaggaaaatgcagagattaccgagtcg
gcggcgcttatgcttgcatctgttgcagacggcgcacttcgtgacgcactttcgcttttg
gacagttgtcttgccgtaagttctcatattgatgaggaagtagtccgcaatgcagcggga
cttgtaagcaaaacatatctttttgaacttgcagcggctataattaacaagaatcccaca
aggtcgcttgagataatagacaggctgtattccgagtcaaaggatatggcaaggctttgt
gatgaacttgttgaacatttcagagcattgatgcttattaaaacaatcaaaaatccgaga
gatatactgataatgtcggacgatgagtttgagcaggcggttacgcagtcggattatctt
tcgcttgcagatatagttttctatatggatgtgctttcaagggcatatcagcgaatgggc
aggggaacaggcgacagaacagagcttgagatggctcttgtaaagctgtcggcaaccgaa
cttgacggtacggtagaggcattgaccgcaagagttactgcacttgaaaaagcggtaaag
cgtggaattaccgtaaattacgcacagcctgcacagcagagcgtacaggcggaagctgcg
caatcggcaagtgtaccgaatacacagaccgaagttgaagaaccgtttgcaaaacccgaa
ccggagcacaagaaagcacctgttgcaaagcctgcaccggaggttaaatctgttgcgcag
agagcaagcgtaaaccttgacgaactttacgataatgcagtgccttttgcaagatgggta
gaagtagttgacagcctgaaatcggtttcaaggtcaatagcggctgcctttgcaggttcg
acagcttacgaaagcggaaattaccttttgattgacacaaacaatgagcttgcgtttgat
ttgttaagacaaaacggcagaagagcagaaataaagcagactttacttgaattgacaggc
aaaaattacagcctcggaccttataaaaggtcaacacctaaaaaagttgaaaaaacagac
ccgctcaactctcttgtgcaaagccttgagggcagcggagtagaaataacacaagaataa
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