Ruminococcus sp. FMB-CY1: LCN94_10585
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Entry
LCN94_10585 CDS
T10118
Name
(GenBank) starch-binding protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc00500
Starch and sucrose metabolism
ruc01100
Metabolic pathways
ruc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LCN94_10585
Enzymes [BR:
ruc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
LCN94_10585
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Gene cluster
GFIT
Motif
Pfam:
CBM26
Alpha-amylase
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
WBX57327
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All DBs
Position
complement(2140377..2143013)
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AA seq
878 aa
AA seq
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MKKNKRIISAALAASMLLPCFATAAVSANAAVVSDENSVSVGDYDLMDNIQDGVILHCFN
WKYNDIKAELNNIAEAGFTTIQTSPAQPGSGTGTWWWLYQPLGFYIGTSELGTKAELESL
CKEAENYGIKVIVDVVANHLAGDHSRIEEDLKPSKYWHTFGGGIDWKNRWQVTHGEIGMP
DIATENSYVQQKVGKYMQELKSVGVDGIRWDAAKHIGVPSEGDNFWSSVTKYGLYNYGEI
LTGPDDRETGNEDIMKEYTDYITVTDSNYGKALRDSFNSGDAPDSSGNWCNRGISCDKLI
YWAESHDTWSNNKDWGYSNDMSQNVIDRAYAVAASQNEVTALYFSRPSSKIKDNIKIGEK
GSTHFTSSEVAEVNKFHNAMNGKADCYKKSNDCSVITRKDGGAVIVKGSGSGNVSVENGG
GYAKPGTYVDKISGNTFTVTSSSISGKVGSSGIAVIYEEENPKPKVSVTPGSSTYETETY
TLTLNTKNAENSQYSVDGGKYQSFSDGTKITIGAGLAYGTKTTINVKASNANGSADKTYI
YTKVDPTLTQKIYFDNSSYNWSNIYAYIYSDAVSNAKWPGEKMTLDSSTGYYVIEVSDSL
ANGAVIFSDGTNSASKRYPADAKPGLNLNGATKIFKANHTFEDYNTPVPTQSTTAQPTTA
KPTTVQPTTAQPTTSPAESVLIGDTNQDGKITISDVTEIQFCINEMITFNQKQKIAADVD
EDGSVDIRDATYIMLYIANQPSSEAKVGQYKGGIAPTQPTTVKPTTQPTTAPTPTTQPTT
SSVSDKYTMTFTDNYNWGNVNCYYWSDSNTKMTSWPGKSMTKSTTNELGQSVYTIDIPSD
ATYVIFNNGSSQTVDIPVTGSAKFYISGSSNGKYTVNN
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagaataaaagaataatcagtgcggctcttgctgcaagtatgttgttgccttgt
tttgcaacagctgcggtgtcggcaaatgcggcagttgtatcagatgaaaattcggtttct
gtcggcgattacgatttaatggacaacattcaggacggtgtaattttgcactgttttaac
tggaagtacaatgatattaaggcagaattaaataatattgccgaggcaggttttacaaca
attcaaacttcacctgcacagcccggcagcggaaccggtacatggtggtggttgtatcag
ccgttgggattttatataggtactagcgaactcggtacaaaggcagagttggaatcacta
tgtaaagaagccgaaaattatggtatcaaggtaatagttgatgttgtagcaaatcatctt
gcaggcgaccattcaagaatagaagaagatttaaagccatcaaagtattggcatactttt
ggaggcggtattgactggaaaaacagatggcaggtaacacacggagaaatcggtatgcct
gatatcgcaactgaaaattcatatgttcagcaaaaagtaggaaaatatatgcaggaatta
aagtcagtcggtgttgacggtattcgctgggacgcagcaaaacatattggcgttccgagc
gagggcgataatttctggagttcggtaacaaagtatggtttatataactatggcgaaatt
cttaccggtcctgatgacagagaaaccggaaatgaagatataatgaaagaatatacagac
tatattacagtaaccgacagcaattacggtaaagctctgcgtgattcatttaattccggt
gatgcacccgattcgtctggaaactggtgcaatcgtggtatttcctgcgataaactcatt
tattgggccgaaagccatgacacatggtcaaataacaaagattggggctattcaaatgat
atgagccagaatgttattgaccgtgcatatgctgttgcggcaagccaaaatgaagtaacg
gctctttatttttctcgtccgtcatcaaaaattaaagataatataaaaatcggtgaaaaa
ggcagcactcactttacaagcagtgaggttgcggaagttaataaattccacaatgccatg
aacggaaaagccgattgttataaaaaatcaaacgactgcagcgtaattacccgtaaagac
ggcggtgctgttattgtaaaaggcagcggcagcggtaatgtttctgttgaaaacggcgga
ggctatgcaaaaccgggtacatatgttgacaaaatttcgggcaacacatttacggttact
tcatcatcaatcagcggtaaggtcggctcaagcggtattgccgttatttatgaagaagaa
aatcctaagccaaaggtaagtgtaactccgggttcttctacatacgaaacagaaacttac
acacttacattaaataccaagaacgctgaaaactcgcagtattccgttgacggcggtaaa
tatcagtcattcagtgacggtacgaaaattacaatcggcgcaggtcttgcgtacggtaca
aagacaacaatcaatgtaaaggcaagcaacgccaacggttcagccgataaaacctacatt
tacacaaaggttgacccgacattaacgcaaaaaatttactttgacaattcatcttataac
tggtcaaatatatatgcttatatttattcagatgcagtttctaatgcaaaatggcctggc
gaaaaaatgactttggattcttctacaggttattatgtaattgaagtttcagattcactt
gcaaacggtgcggttattttcagtgacggcacaaactctgcaagcaagcgttatcctgca
gatgcaaagccgggattaaatctcaacggcgctacaaagatattcaaagcaaatcacact
tttgaagattataatacgcctgtaccaacccagagtacaacagcacaacctactacggca
aagcctacaacagtacaacctactacggcacaacctactacatctcctgctgaaagcgta
cttatcggtgatacaaatcaggacggtaaaattacaatcagcgatgtaactgaaattcag
ttttgcatcaatgaaatgattacatttaatcaaaaacaaaagattgctgccgatgttgac
gaagacggttctgttgatatcagagatgctacatacattatgctgtacattgcaaatcag
ccaagcagtgaggccaaggtaggtcaatacaaaggcggaatcgctccgacacagccgaca
acggttaaacctacaacacagcctactacagcgccgacaccgacaacccaacctacaact
tcatctgtatctgacaaatatactatgacatttacagataactacaactggggtaatgtg
aattgctactattggtctgacagcaatacaaaaatgacatcatggccgggaaaatcaatg
actaagtcaacaacaaatgaattaggtcagagtgtttataccattgatattccaagcgat
gctacatatgtaatattcaacaatggcagcagtcagactgttgatattcctgttacaggc
agtgccaagttttatatttcgggcagttcaaacggaaaatataccgttaataactga
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