Ruminococcus sp. FMB-CY1: LCN94_11340
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Entry
LCN94_11340 CDS
T10118
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCN94_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruc03400
]
LCN94_11340
Enzymes [BR:
ruc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LCN94_11340
DNA repair and recombination proteins [BR:
ruc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCN94_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
PP-binding
Motif
Other DBs
NCBI-ProteinID:
WBX57469
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All DBs
Position
complement(2303052..2303888)
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AA seq
278 aa
AA seq
DB search
MTCTEFDGYICIDNVTDLDLRQTLDCGQSFRWTENADGSFDGIAFGKKVRVRLDGERLYI
ENSNKADFESIWKDYFDLELDYGKIREEISEIHPVLKEAAKYAPGIRILRQEPYEALCTF
IISQNNNIKRIKGIVQRLCENFGEEISPGDFAFPTPQKMAELSADDLAPLRAGFRNRYLI
DAAQKVYSGEVDLESCRTLDYEQARKELMKITGVGVKVADCTLLFGLHRIEAFPVDVWMK
RAMEKLFPGMMPSDFGDCAGIAQQYIFHYSRMHPELFD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcaccgaatttgacggttacatctgtatcgacaatgtaacagaccttgattta
agacaaacacttgactgcggtcagagctttcgctggacagaaaatgccgacggttcgttt
gacggaatcgctttcggtaaaaaagtcagagtaagacttgacggtgagcgtctgtatatc
gaaaactcaaataaagctgattttgaaagtatatggaaagattactttgacctcgaactt
gattacggtaaaatcagagaagaaataagtgaaattcaccccgtgcttaaagaggcggca
aaatatgctcccggtataagaatattaaggcaagagccttatgaggcactctgcacattc
attatttcacaaaataacaatataaaaagaatcaagggtattgttcaaagactttgcgaa
aacttcggagaagaaatttctcccggagattttgcttttcctacaccgcaaaaaatggcg
gaactttcagccgatgaccttgcgcctttaagggcaggctttcgtaatcgttaccttata
gatgcggcacaaaaggtttacagcggtgaggttgaccttgaaagctgccgcacgcttgat
tacgagcaggcacgaaaagagcttatgaaaattacgggtgtcggagttaaggtcgccgac
tgcactctgcttttcggtttacacagaatagaggcttttcctgttgatgtatggatgaaa
agggcaatggaaaagcttttccccggtatgatgccgtcggatttcggcgattgtgcgggg
atagcacaacaatacatatttcattacagcagaatgcacccggaattgtttgattaa
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