Rufibacter sp. DG15C: TH61_04160
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Entry
TH61_04160 CDS
T04326
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TH61_04160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rud02000
]
TH61_04160
Enzymes [BR:
rud01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
TH61_04160
Transporters [BR:
rud02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TH61_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA
Zeta_toxin
RsgA_GTPase
AAA_29
AAA_22
AAA_16
nSTAND3
AAA_24
AAA_18
ABC_ATPase
AAA_25
SpoIIIAC
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AMM50528
UniProt:
A0A127B028
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All DBs
Position
998080..999912
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AA seq
610 aa
AA seq
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MKTYFRILNFARPFNQYVPWYALATLLATVFGIMNFSLLMPLLSVLFDQVTPAEAAQMTR
KPEFSFTLGFIKQFFYYNFGSIIQEQGKLGALKFICLILIGSVFLANVFRYLGLRIEGVV
RAKVIKRLRMAVYERLTQLQLGFFSNQRKGHVMSILTNDVQEVENSVVSTLNVLFREPFL
LIGYFVVLFYLSPSMTFFSLLVLPISGGIIALISKKLRKQSSSGQDALGSILSIIDETLG
GMRVIKGFNAQPYVIQKFEQSNNWYARVATAIFNRRGMASPVSEFLGVTVVAGILYYGGS
LVLGGNSDLEASELIGYLIIFSQVLSPVKAMSNAFSNIQRGLVAGERVLELIDTEPLIRD
KSDSKTLPAFTQSIEFKNVGFKYGAEPILQDINLTIEKGKTIALVGPSGGGKSTLADLLP
RFYDPTEGTISIDGVDLRDCSLHSIREQMGIVTQESILFNDTIFNNIAFNKTDATEAEVI
AAAKIANAHEFIMQSPDGYQTIIGDRGGKLSGGQRQRLSIARAILKNPPILIMDEATSAL
DTESEKLVQEALTNLMKNRTSLVIAHRLSTIQHADEIIVLQAGRIVERGNHATLVQQGGL
YFKLTQMQHN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtatttccgcatcctcaattttgcgaggccctttaatcaatatgttccctgg
tacgcacttgccactttgctggccacggtgttcgggattatgaacttcagcttgttgatg
ccgcttttgtcggtgctgtttgaccaggtgacgcccgctgaggccgcgcaaatgacccgc
aagcctgagttttccttcacactggggttcatcaaacaattcttctactacaacttcggg
agtatcattcaggagcagggcaaattaggagccttgaagttcatctgcttgattttgatc
gggtctgtctttctggccaacgtgttcaggtatctggggcttaggattgaaggcgtggtg
cgggccaaagtgattaagcgcctgcgcatggccgtatatgagcgactgacgcagttgcaa
ctgggtttcttctctaaccagcgcaaaggccacgtcatgtctattcttaccaatgacgtg
caggaagttgagaattccgtggtgagcactttgaatgtgttgttcagggagccgtttcta
ctgattggttactttgtggtgctgttctacctgtcaccgagcatgacgtttttcagtttg
ctggtcttgcctatctcggggggcatcattgccttgatttctaagaaactacgcaagcag
tctagtagcggccaagacgccttgggttccatcttgagcatcattgacgagaccttaggc
ggcatgcgggtcatcaaaggattcaacgcccagccgtacgtcattcagaaatttgagcag
agcaataattggtacgcgcgcgtagccacggccatctttaacagacgcggcatggcctcg
ccggtatctgaatttctaggagtcacagtagtggcaggcattttatattatggcggctct
ttggtgttaggcggaaactcagacttagaggcctctgaattgattggctacctcatcatc
ttctcacaggtattgtcgccggtgaaggccatgtctaatgcgttcagcaacattcagcgc
ggattggtggccggggagcgcgtgttggaattgatagatactgagccgctcatcagagac
aagtcagattctaagacattaccggctttcacgcagtccatagaattcaaaaacgtaggc
tttaaatacggtgccgagcccatcttgcaggacatcaacttgaccattgagaaaggaaag
accatcgctttagtaggtccgtcgggtggtggaaaatctacgctagctgacttgctaccg
cgcttttatgaccccaccgaaggcaccatctctattgacggcgtagacctgcgcgactgt
agtctgcattctatcagagagcagatgggtattgtgacgcaggagtccatcctgttcaat
gacaccatcttcaataacattgcttttaacaagacagacgccactgaggccgaagtaata
gccgctgccaagattgccaacgcgcatgagttcatcatgcagagcccagacggctaccag
accattattggcgaccgtggcggaaaactatccggtggtcagcgtcagcgcttgagcatt
gcccgcgccattttaaagaacccacccatcttgattatggatgaggccacctcggcgctg
gacaccgaatctgagaaactggtgcaggaagccttaaccaacctcatgaagaaccgcact
tccctggtcatcgctcaccgtctaagcaccattcagcacgcagatgaaatcattgtttta
caggccggccgcattgtagaacgcggcaaccatgccacgctggttcagcaaggcggtctt
tacttcaaactcacccagatgcagcataactaa
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