Rufibacter sp. DG15C: TH61_04315
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Entry
TH61_04315 CDS
T04326
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rud
Rufibacter sp. DG15C
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rud03019
]
TH61_04315
03009 Ribosome biogenesis [BR:
rud03009
]
TH61_04315
Messenger RNA biogenesis [BR:
rud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TH61_04315
Ribosome biogenesis [BR:
rud03009
]
Prokaryotic type
rRNA processing factors
TH61_04315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
C2185-like_N
SatD
SPACA7
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
AMM50555
LinkDB
All DBs
Position
complement(1036512..1038119)
Genome browser
AA seq
535 aa
AA seq
DB search
MSNELIINSTQDGERIALLQDKRLVEYHFDRNDTNYSVGDIFLGTVKKVMPGLNAAFVDI
GYSKDAFLHYHDLGENIKTLNKFVKVVQNQRNATAKLNQVKFEPEIEKLGKMADVLKKGQ
QILVQIVKEPISTKGPRLSCEISLAGRYLVLVPFSNTVSVSKKIVSKEERTRLKRLITSI
KPENFGVIIRTVAEGREVAELDKDLRGMLATWEEGITTLKTAKERDKVIGELGRSSSMLR
DILNESFDNIVVDDAKLYDEIKTYIETIAPDKLKILKHYSGKVKTFEHFNIEKQLKSLFG
KTVSIPGGGYLVIEHTEALHVIDVNSGNKSNSETDQEATALNVNLTAAKEVARQLRLRDL
GGIIVVDFIDMKSAENRQKVQDVVKEEMKKDRSKYTVLPISKFGLMQITRQRVRPEQNIV
TGEVCPTCQGSGKISASILVTDDIDQTIDDLLTRQNQKNITLYVHPFIHAYYTKGILSKQ
RRWFLKHMKWVNVMKDTALALTEFKVMDEHGDEIELKSAYSEVNSLQDRDVVVEE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacgaattaattattaattctactcaagatggagaacgaatagcccttcttcag
gataagcgactagtagagtatcattttgatagaaatgacacaaactactctgttggagat
atttttctgggaaccgtcaaaaaagtaatgcccggtctgaacgcagcgtttgtagacatt
gggtactccaaagacgccttcctgcactaccatgatttgggagagaacatcaagactctc
aacaaatttgtgaaagtggtgcagaaccagagaaacgccaccgccaagctgaaccaagtt
aagtttgagcctgaaattgaaaagctgggcaagatggcagacgtccttaaaaaaggacag
cagatcttggtacagattgtcaaagagcctatctccaccaaagggccgcgtctctcttgt
gagatttccctagccgggcgttacttggtgctggtacccttctctaacacggtaagcgtg
tctaagaagattgtcagcaaagaggaacgcacccgcctgaaacgcctcatcacctccatt
aaaccggagaactttggcgtcatcatcaggaccgtggccgaaggccgggaagtagcggaa
ctggacaaggacctgcgtggcatgttggccacttgggaagaagggattaccactttgaag
accgccaaagagcgtgacaaagtgattggggagctaggacgctcctcctccatgttgaga
gacattttgaatgaaagttttgacaacatcgtggtagacgacgctaagttgtacgacgag
atcaaaacttacattgagaccatcgccccggataagctgaagattctgaagcactattcg
ggcaaggtgaaaacctttgaacactttaacattgaaaagcagctgaaatcccttttcggg
aagacagtgagcattccggggggtggctatctggtgattgaacacacagaggccctacac
gtgatagatgtgaacagcggcaacaaatccaactctgagacagaccaggaagccaccgct
ttgaatgtgaatcttaccgcggcaaaagaggtagcgcgtcagctgcgccttagggacctg
gggggaatcattgtagtagactttattgacatgaagtctgccgagaaccggcaaaaagtg
caggatgtagtgaaggaagagatgaagaaggaccgttccaaatacacggtgctgcctatc
tccaaattcggactcatgcagattacccgccagcgcgtacggcctgagcaaaatattgta
accggtgaagtctgccctacctgtcagggaagcggtaagatctcggctagcattctagtg
acggatgacatagatcagaccattgacgatctgttgacccgccagaatcagaaaaacatt
acgctgtacgtgcatccgtttatacacgcctactacaccaagggcattctctccaaacaa
cggagatggttcttgaaacacatgaagtgggtgaacgtgatgaaggatacggcgcttgcc
ctcacagaattcaaagtgatggacgaacacggtgatgagattgagctgaaatcggcttac
tcagaagtgaacagtctgcaagacagagacgtggtggtagaagaataa
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