Rufibacter sp. DG15C: TH61_04885
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Entry
TH61_04885 CDS
T04326
Name
(GenBank) transglycosylase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud00550
Peptidoglycan biosynthesis
rud01100
Metabolic pathways
rud01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TH61_04885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TH61_04885
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rud01003
]
TH61_04885
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rud01011
]
TH61_04885
Enzymes [BR:
rud01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
TH61_04885
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TH61_04885
Glycosyltransferases [BR:
rud01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
TH61_04885
Peptidoglycan biosynthesis and degradation proteins [BR:
rud01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
TH61_04885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AMM50645
UniProt:
A0A127B0E0
LinkDB
All DBs
Position
1165158..1167455
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AA seq
765 aa
AA seq
DB search
MFSSPNSTFRKIISALWLCFAGGFIFFVLYVFAVSINFLNLFGDLPDLKALENPKSELAS
EVYSEDGVLLGKYFRENRSPVTYEQLPKHLVDALVATEDIRFEEHSGIDFKGTLAVPYYQ
LTGKQDRGSSTLTQQLARNLFRTRSDLNDGLLSSVPGLRMLIIKTKEWIMAIKLERSYTK
KEILLMYLNTVDFGSNAYGVKVAAKTFFNKEPEQLTLEESATLVGVLKGPSFYSPVSQPE
RSKARRNTVLDQMLKYNYIDQPAYQASVSKPMKLDFNVENQNKGLAPYFRTEMGKFLTKW
AKENGYDLYSDGLRIYTTINSRMQKHAEDAVEDHMKAMQKIFFQQWKGKNPWIDENGKEI
KNFLATQIKRTARYQSLNEQYDGNEDSIKYHLTKKIPMRIFSWKGEIDTVMSPMDSLRYY
KHFLHAGFMAMNPLNGHVKAWVGGTNYKYFKYDHVQQGARQPGSTFKPFVYTAAIEAGYS
PCYEVVDAPVTIINEDGVPWTPKNSEGVYTGRRYTLREALALSVNTITTFLMKKLGPEAV
VTTARRLGITTPLEAVPSLALGSSDVTLFDMVGAYGTYVNKGVWTQPQYILRIEDKAGTV
VQEFAPKTVEALSEETAYLMVHMLQGSADTRGGTAYYGLRFRNNLKNEIGAKTGTTSNYS
DAWFMGITPDLAAGVWVGGEDRSIHFRSAAYGQGNKLAMPIYGAFMRKVYADKALNVSKA
PFPKPTTPLSTNINCGAYNTTPALPDSVKQDQVLTVPQNVTEEEF
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtcgcctaatagcacgttccggaaaattatttcggcgctgtggctttgcttt
gctggaggattcatcttcttcgtcctatacgtttttgcggtaagcatcaactttctcaac
ctgtttggagaccttccggaccttaaggccctggagaatcccaaaagcgaactcgcctct
gaggtgtattcagaagacggcgtgctgctgggaaaatacttcagggagaaccgcagcccg
gtgacctatgaacaactgcccaaacatttggtagacgcgttggtggctacagaggatatt
cggtttgaagagcactccggtattgactttaaaggcaccctggcggtaccgtattaccaa
ttgactggcaagcaggaccggggctccagtacgcttacccagcagttggcgcgtaacctg
tttagaacccgcagtgacttgaacgacggtctgttaagcagcgtacccggtttgcgcatg
ctcatcatcaagaccaaggagtggatcatggccattaagctggagcgctcttacaccaag
aaggagatcctcttgatgtacctgaacaccgtggattttggcagcaacgcctacggcgtg
aaagtggccgctaaaacgttctttaacaaagagcctgagcagttaactttggaagagtca
gctactttggtaggcgtcttaaaaggtccttcattttacagcccggtaagccaaccagag
cgctctaaagccagacgcaatacggtgctggaccagatgctcaagtacaattacattgac
cagccagcctaccaggccagcgtaagtaaacccatgaaactggacttcaatgtagaaaac
cagaacaagggactggcgccttacttccggacggagatgggcaagttcctgaccaaatgg
gccaaggagaatggttatgatctgtactcagacgggttgcgtatctataccaccatcaat
tcgcgcatgcagaagcacgccgaagacgctgtggaagaccacatgaaggccatgcagaaa
attttcttccagcaatggaaaggcaaaaacccttggatagacgagaacggcaaagaaatc
aagaacttcctggccacccagataaaacgcacggcccgttaccaaagcttgaatgagcag
tatgacggcaacgaagattctatcaagtaccacctgaccaagaaaatacctatgcgcatc
ttctcctggaaaggtgagattgacacggtcatgagccctatggattcgctgcggtattac
aaacacttcttgcacgcgggctttatggccatgaaccctttgaacggccacgtgaaggct
tgggtgggcggcactaattacaagtacttcaagtatgaccacgtgcagcagggtgcccgt
cagccgggctctacctttaagccattcgtttacaccgccgctattgaggcaggctactct
ccttgttatgaggtggtagatgcacccgtaaccatcatcaacgaagacggtgtgccgtgg
actcctaaaaacagtgaaggcgtgtacacgggtcgtaggtataccttgcgtgaagcctta
gccctttcagtgaataccatcactaccttcttaatgaagaagctgggtcccgaagcggtg
gtcactactgcccgccggttgggcatcaccacgccattagaggctgttccttctttggct
ttggggtctagtgatgtaaccttgtttgacatggtgggcgcgtatggtacctatgttaac
aaaggcgtctggacgcaaccacaatatatccttcgcattgaagacaaggccggtaccgta
gtacaggagttcgcacctaagacggtagaggctttaagcgaagaaacagcctacttgatg
gtgcacatgctgcaaggctccgcagacacgcgcgggggtactgcctattatggcctaaga
ttcaggaataacttaaaaaacgagattggtgccaagaccggtactacttctaactactct
gatgcatggttcatgggtattacgcctgacttggctgctggtgtctgggtgggcggcgag
gatcgtagtatccacttcaggagtgccgcttatggacaagggaacaagttagccatgcct
atctatggagccttcatgcgaaaggtgtatgctgacaaagcgttgaacgtctctaaggcg
cctttccctaaaccaactacgcctttgtcaactaatatcaactgtggggcttataataca
acacctgcgctccctgattccgtaaaacaagaccaagttttaaccgttccacaaaacgta
acggaagaagagttttaa
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