Rufibacter sp. DG15C: TH61_05560
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Entry
TH61_05560 CDS
T04326
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud03030
DNA replication
rud03430
Mismatch repair
rud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TH61_05560
03430 Mismatch repair
TH61_05560
03440 Homologous recombination
TH61_05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rud03032
]
TH61_05560
03400 DNA repair and recombination proteins [BR:
rud03400
]
TH61_05560
Enzymes [BR:
rud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TH61_05560
DNA replication proteins [BR:
rud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TH61_05560
DNA repair and recombination proteins [BR:
rud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TH61_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AMM50752
LinkDB
All DBs
Position
complement(1335038..1335952)
Genome browser
AA seq
304 aa
AA seq
DB search
MDFIALDFETATADRDSPCEIGLTYVKEGQVVDTESWLIKPRSFPYFAPFNVSIHGITPQ
DVADEPEFHDLWEVLRPRLENNLIVAHNAGFDLNVLRGTLASYSIPFPSLDYACSYILSR
KAWPGLASYNLKSLCSQHSIRPGHHRAAADSRACAELTLKILGQTQTSCVRECSSKLRTS
IGRLFDGGYTPSETKRDYSGRGFNPIIGDASKHNPESIFFGRSVVFTGALSSMKRAAAQQ
VIADIGGANHSGVRKDTDYLVVGQQDFRVVGEDGMSGKQEKAVSLIARGAPLEILSERDF
LCNI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatcgccttagactttgagacggccaccgctgacagggacagcccttgtgag
attggcctcacttatgtgaaggaggggcaggttgtggacacggagtcgtggcttatcaag
ccaaggtcctttccgtactttgcgcctttcaacgtatccatccatgggataacccctcag
gatgtagcggatgagcccgaatttcacgatctttgggaggtgctccgcccgaggctggag
aacaacctcattgtcgcacacaacgctggcttcgacctcaacgtcctcagagggaccctt
gcctcatacagtattcccttccccagcctcgactatgcctgtagctatatcctgtccagg
aaggcctggcccgggctcgcttcatacaacctcaagtcgctctgcagccagcacagcata
aggccgggccaccatcgggcggcggccgactccagagcctgcgctgagctgacgctgaag
atcctcgggcagacacagacttcctgcgtcagggagtgctcctcaaagcttagaacctct
atcgggagactgttcgatggaggttacacgccgtcagaaaccaagagggactacagcggc
agagggttcaaccccatcataggggatgcctcaaagcacaacccggaaagcattttcttc
gggcgctccgttgtgttcaccggcgccctttcctccatgaagagagccgccgctcagcag
gtcattgcagacattggtggcgcgaaccattccggggtgaggaaggacacagactacctg
gtggtggggcagcaggacttcagggtcgtgggcgaggacgggatgagcggcaagcaggag
aaagcggtttcccttatcgctaggggtgcccctttggagatcctatccgagagagacttc
ctctgcaatatctaa
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