Rufibacter sp. DG15C: TH61_07950 Help Entry TH61_07950        CDS       T04326                                  Name (GenBank) RNA polymerase sigma54 factor   KO K03092   RNA polymerase sigma-54 factor Organism rud  Rufibacter sp. DG15C Pathway rud02020   Two-component system rud02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:rud00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     TH61_07950  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     TH61_07950  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rud03021]     TH61_07950 Transcription machinery [BR:rud03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      TH61_07950 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_12 LacI SF3b1 HTH_IclR Motif Other DBs NCBI-ProteinID:  AMM51127 LinkDB All DBs Position 1859370..1860854 Genome browser AA seq 494 aa AA seqDB search MQRLDLKQLLSQKLSPQQIQFIKLLQVPTAELEARIKEELEVNPALEEGDVADDAPAEED TSSDADEDFDNTEDDYAEEEMRRDDDDGDLNLEEYMSDDDIAGYKMQGDGPGEEEERETP IAFTGSLTDSLMDQLGFLNLNEKQQAIGVQLIGSIDEEGYIRRDLQAISNDLAFSQNIEA SVEEIEDVLRRIQAFDPPGIAARDLQECLLLQLERRDPDDITEVAEQIIHDTFDEFTKKH YARIQQKLELEDYELKSAIDLILKLNPKPGGSGGATRVQYVIPDFIITNEEGQLQLSLNA RNAPDLRISRSYADMFDAYDKSSKTDKKLKETVTFVKQKLDSAKWFIDAIKQRQNTLLRT MESIMKRQYEYFLDGDESKLRPMILKDIAEDIGMDISTVSRVANSKSVQTEFGIIPLKFF FSEGIATDAGEEASSREVKAILKDIIEKENKRKPLSDDKIEKMLNEKGYNIARRTVAKYR EQLNIPVARLRKEL NT seq 1485 nt NT seq  +upstreamnt  +downstreamnt atgcagagacttgacttaaaacagcttttatcccaaaaactatcaccccagcagatacag ttcataaaactgttgcaggtgcctaccgctgagctggaggcccgcatcaaagaagaactg gaggtaaaccctgccctggaagaaggtgacgtagccgatgatgcccccgccgaggaggac acctcctcggatgcggacgaggatttcgacaataccgaagatgattacgccgaggaggag atgcgccgcgacgatgacgacggcgacctcaacctggaagaatatatgtctgatgatgac attgccggctataaaatgcaaggcgatggccccggtgaggaagaggagcgcgagacgccc attgccttcaccggttccctcaccgactccctcatggaccaactgggcttcctgaacctc aatgagaaacagcaggccattggcgtacagttgattggcagcattgacgaggaaggctac atacgccgtgacttgcaggccatctccaatgacctagccttttcccaaaacatagaagcc agcgtagaggaaattgaagatgtgctgcgccgcatccaagcctttgacccgcccggcatt gccgcccgtgatctgcaagagtgtctgctcctgcaactagagcgccgcgacccagatgac atcaccgaggtagctgagcagatcatccatgacacctttgatgagttcaccaagaagcac tacgcccgcattcagcagaaactggagctggaggactatgagttgaagtcggcgatagac ttaatcttgaagctcaaccccaagcccggcggaagcggcggcgctacgcgcgtgcagtac gtgattccagacttcatcatcaccaatgaagaaggccagttacaactgtccttgaacgcc cgcaacgcgccagacctgcgtatctcccgctcttacgccgacatgtttgacgcctatgac aaaagctctaagaccgacaagaagctcaaggagacggtcacgtttgtgaagcagaagctg gactcagccaaatggttcattgacgccatcaaacaacgccagaatacgctcctgcgcacc atggaatctatcatgaagcgccagtatgagtatttcctggacggggatgagagcaagctg cggcccatgattttgaaagacatcgccgaggacataggcatggacatttcaaccgtgagc cgcgtggccaacagcaagagcgtgcagacggagtttggcattattcctttgaaattcttc ttctctgaaggtattgccaccgacgccggcgaggaggccagtagccgtgaggtgaaagcc atcctcaaagacatcattgagaaggaaaacaagcgcaagcctctctcagatgacaagatt gaaaaaatgctcaacgagaaaggctacaacatagcccgccgcacagtggccaagtaccgt gagcagctcaacataccggtagcgcgtttgcgcaaagaactgtaa

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