KEGG   Rufibacter sp. DG15C: TH61_08350
Entry
TH61_08350        CDS       T04326                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rud  Rufibacter sp. DG15C
Pathway
rud03030  DNA replication
rud03430  Mismatch repair
rud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TH61_08350
   03430 Mismatch repair
    TH61_08350
   03440 Homologous recombination
    TH61_08350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rud03032]
    TH61_08350
   03400 DNA repair and recombination proteins [BR:rud03400]
    TH61_08350
Enzymes [BR:rud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TH61_08350
DNA replication proteins [BR:rud03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TH61_08350
DNA repair and recombination proteins [BR:rud03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TH61_08350
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DEDDh_C DNApol_Exo
Other DBs
NCBI-ProteinID: AMM52840
LinkDB
Position
complement(1958205..1958858)
AA seq 217 aa
MFPQTRPVLENVTVLDFETTGLSASKGRVIEIAALRGANGKVVSQFQTMVKVTTPLPRKI
TEITGIRDEDLVHGMEEQAAFTVLREFIGDSVVVAHNAPYDLSFLYAAYRRFKMPATQHP
FLDTLSVCRMRQPSPRSLADMCRVYNVPLPRWHRALPDTTATWHLLHRLHEESPVDQLLN
KIVINPKYGSPRWLPPYAELVPGPSFFKPEDEAPTNL
NT seq 654 nt   +upstreamnt  +downstreamnt
ttgtttccgcaaaccaggccggtactggagaatgtgaccgtgctggactttgagactacg
ggcttaagcgccagcaagggccgcgtgattgagatagccgccttgcgcggggctaatggc
aaagtggtgtcacagttccagaccatggtgaaggtgactaccccgctcccgcgaaaaatc
acggagataactggcattagggacgaggacctggtccacggcatggaggagcaggccgcg
ttcaccgttctaagggagtttattggcgacagcgtggtggtggcgcacaacgccccttat
gacctaagctttttgtacgccgcctatcgccgctttaagatgcccgccacccagcatccg
tttctggacacgctgtcggtgtgccgcatgcgccagccttcgcccaggagcctagccgac
atgtgccgggtgtacaatgtgccgctgcccaggtggcaccgcgccctgccagacaccacc
gccacctggcacctgttgcacagactgcatgaggaaagccctgtggaccagctcctcaac
aagatagtcatcaaccctaaatacggttcgccgcgctggttgccgccatatgcagagttg
gtgcccggtccctccttctttaaaccagaggacgaggcgccaaccaacttataa

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