Rufibacter sp. DG15C: TH61_09715
Help
Entry
TH61_09715 CDS
T04326
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TH61_09715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rud03021
]
TH61_09715
03400 DNA repair and recombination proteins [BR:
rud03400
]
TH61_09715
Enzymes [BR:
rud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TH61_09715
Transcription machinery [BR:
rud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TH61_09715
DNA repair and recombination proteins [BR:
rud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TH61_09715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AMM51398
UniProt:
A0A127B290
LinkDB
All DBs
Position
2273793..2274782
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFHGQFEFKPLEKGYGVTIGNALRRILLSSLEGYAISSIRVP
SVLHEFSTIEGVVEDVSEIILNLKMVRFKKVGDLVDDKITVSISKQDTFTAGDINKFSGS
FQVLNPDLVICHLDPEASFEIELTIQKGRGYVPAEENKPVDQVFGQIAIDAIFTPIKNVK
YSVENTRVEQKTDYERLLLEISTDGSIHPEDALKGAANILIQHFMLFSDNTMTFETVKPE
EEEAVDEEMLHMRKVLKTPLHDMDLSVRAYNCLKAADIRTLGDLVQLDLADMMKFRNFGK
KSLTELENLVSEKGLNFGMDISKYKLEED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattagcatttcaaatgccagagaaagtcgtgatggagaaatccgatgacttc
cacgggcaatttgaatttaagccgctagagaagggctatggtgttaccattggaaacgca
ctgagaagaattcttctatcatctttagaaggatatgctatctccagcattcgtgttcct
agtgtactccatgagttctctaccattgaaggtgtggttgaagatgtctctgaaatcatc
ctgaacttgaaaatggttcggtttaaaaaggttggtgacttagttgatgacaagattact
gtcagcatcagcaagcaagacaccttcactgccggtgacatcaacaaattctcaggttca
ttccaggtattaaaccctgatttggttatctgtcatttagatccagaagcatcttttgag
attgagttgactattcaaaaaggcagaggctacgtacctgccgaggagaataagccagta
gatcaggtgtttggacaaatagctattgacgctatcttcacacctattaagaatgtgaag
tacagcgtagaaaacacgcgtgttgagcagaagacggattatgagcgccttttattagaa
atctctacggatggatctatccaccctgaagatgctttgaaaggagctgccaacattttg
attcaacacttcatgttgttctcagacaacaccatgacttttgaaactgtgaagcctgaa
gaggaagaagcggtagatgaagaaatgctgcacatgagaaaagtattgaagacgccattg
catgacatggatctttctgtacgtgcctacaactgcttaaaagcagctgacattagaacg
ttaggagacctagtgcaattagacttggcagatatgatgaagttcagaaacttcggtaag
aaatctcttactgagctggagaacctagtatctgaaaaaggtcttaactttgggatggat
atctcaaagtataaattagaagaagattag
DBGET
integrated database retrieval system
