Rufibacter sp. DG15C: TH61_09805
Help
Entry
TH61_09805 CDS
T04326
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud00300
Lysine biosynthesis
rud00470
D-Amino acid metabolism
rud01100
Metabolic pathways
rud01110
Biosynthesis of secondary metabolites
rud01120
Microbial metabolism in diverse environments
rud01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TH61_09805
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TH61_09805
Enzymes [BR:
rud01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
TH61_09805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AMM51413
LinkDB
All DBs
Position
2300155..2300928
Genome browser
AA seq
257 aa
AA seq
DB search
MQLTFYKYQGTGNDFVVMDNLNGDISLTQEQVAFLCDRRNGVGADGLMLLQTKDGYDFEM
VYYNADGKVGSMCGNGGRCLVAFAQFMGVIETEAYFIASDGPHRATVEHGLVHLQMKDVD
GIEEFEDACFLNTGSPHYVKTVENLQELDVFNKGRAIRYSDRFKAEGTNVNFVEQKPDNT
LFVRTYERGVEDETFSCGTGVTACALAASREGFTSPVHIQVLGGELQVSFEQEGSGFKNV
FLIGPAEQVFKGEILLA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaccttctataaataccagggcaccggcaatgactttgtggtgatggataat
ttgaacggcgacatctccttgacgcaggagcaggtggcgtttctgtgcgaccgtcgtaat
ggcgtgggcgctgatggcctcatgctcctgcaaaccaaggatggctatgactttgagatg
gtctattataatgcagatggcaaggtgggctctatgtgcgggaatggtggacgctgcttg
gtggctttcgcgcagttcatgggcgtgattgagacagaagcttatttcattgcctctgat
ggtccgcaccgcgctaccgtggagcacggcctggtacatttgcagatgaaagatgtagac
ggtattgaagagtttgaagacgcctgtttcttgaacacaggttcgccgcattacgtgaag
accgtggagaacctgcaagagttggatgtgttcaataaagggcgggctattcggtattca
gaccgtttcaaggccgagggaaccaatgtcaactttgtggaacagaagccggacaacacc
ttgttcgtgcgcacctatgagcgaggcgtagaggatgagaccttctcctgcggaaccggc
gtgacggcttgtgctttggctgctagtagagaaggctttaccagtccggtgcatattcaa
gtgttgggcggggagttgcaggtgagctttgagcaggaggggagcgggttcaaaaacgtc
ttcttgattgggccggcagaacaggtgttcaaaggcgaaatattgctcgcttaa
DBGET
integrated database retrieval system