Rufibacter sp. DG15C: TH61_11275
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Entry
TH61_11275 CDS
T04326
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rud
Rufibacter sp. DG15C
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TH61_11275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rud03019
]
TH61_11275
03009 Ribosome biogenesis [BR:
rud03009
]
TH61_11275
03036 Chromosome and associated proteins [BR:
rud03036
]
TH61_11275
Enzymes [BR:
rud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TH61_11275
Messenger RNA biogenesis [BR:
rud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TH61_11275
Ribosome biogenesis [BR:
rud03009
]
Eukaryotic type
90S particles
RNase
TH61_11275
Prokaryotic type
rRNA processing factors
TH61_11275
Chromosome and associated proteins [BR:
rud03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TH61_11275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Ribosomal_S5
Roc
Motif
Other DBs
NCBI-ProteinID:
AMM51640
LinkDB
All DBs
Position
2633201..2633953
Genome browser
AA seq
250 aa
AA seq
DB search
MSPIRPVLRAFHKFFYKDKAFVNAITQITGMAPDNLHLYQLAFTHTSFVRLNLKGNQETN
ERLEFLGDAILGAVVAEYLFKKYPYKDEGFLTEIRSRMVNRESLNSLAMKVGLSTLIKVD
TTTGVSRHKFINGNALEALVGAVYLDKGYKQTKTFILDRLMKPHFDLHQLTTTTSNFKSK
LIEWAQGQNRSIRFEIIGQKQSGSNTEFTAAVVVDDEAIGTGSGLSKKKAEQAAAEKSME
ALKASGAIIG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgtctccgattagaccggttctccgcgcttttcacaaattcttctacaaagacaaagcc
tttgtcaacgccatcacgcagattacgggcatggcgccagacaacttgcacctgtaccaa
ttagcgtttacgcacacgtccttcgtgcgcctgaacctgaaaggaaaccaggagaccaat
gagcgccttgagtttttaggggatgccattttaggcgcggtagtagccgagtacctgttc
aaaaaatacccttacaaagacgaaggcttcctaaccgagatccggtcccgcatggtgaac
cgtgagtctttgaacagtctagccatgaaagtgggcttgtctacgctcatcaaggtagat
accaccacgggtgtgtcgcggcataagttcatcaatggcaatgccctagaggcattggta
ggcgccgtatacctggacaaaggctacaagcagactaagacgttcatcctggaccggctc
atgaagccacactttgacctgcaccaactcaccaccaccactagcaactttaagagcaaa
ctcattgagtgggcgcaaggtcagaaccggagcattcggtttgagatcattgggcagaag
cagtctggcagcaacacagagttcaccgccgctgtggtagtggatgatgaggccattggc
actggcagcggattatctaagaagaaagcagagcaggccgccgccgagaaaagcatggaa
gccctcaaagccagcggcgccatcatcggttag
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