Rufibacter sp. DG15C: TH61_12615
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Entry
TH61_12615 CDS
T04326
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud00540
Lipopolysaccharide biosynthesis
rud01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TH61_12615
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rud01005
]
TH61_12615
Enzymes [BR:
rud01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
TH61_12615
Lipopolysaccharide biosynthesis proteins [BR:
rud01005
]
Core region
TH61_12615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
LrgA
Motif
Other DBs
NCBI-ProteinID:
AMM51852
UniProt:
A0A127B334
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All DBs
Position
complement(2946713..2947996)
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AA seq
427 aa
AA seq
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MNQKEKILYALLLLFFISLFTGSLAAYSSIATGALFLYGFFFNSLSEKWQLLKERKHILA
MLVFYGFLVVSVLLSEDKDSGLHHLKLRLPLLLLPLGVGLLDLRREFIDKVLLSFATITC
LVLFICLLSSIYFSGFFAKPEFLYNDALTVILERQSIYIALLVNISIFIFARAIFYSNHK
HKGLLTLGTLFLYGIAYLLASRIMFAWLLVVTTGFSFYYVVKHRKLLEGLTLVLGLVIGT
VVVNKTLPLTFNRYKEVAYSSFKFENMGRESHYNMQITEDQWNGVNFRLAVWTCGMELFK
ENLVLGTGLGDKDAALKEKYAEKNFQYAIQTDRNVHSNYIDILYSLGLVGMLLFALSWIG
LPILQALKSQNGLAVLVVLTFAAAWVSEVYFARSIGATLTGFFLPFLLLVLPPEKDSIVL
NDFDDLK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaaagagaaaatcctctacgcattgctgttactgttttttatttctctgttc
actgggagcttagctgcctactctagtatcgccacaggtgccttgtttctgtatgggttc
tttttcaactctttgagtgagaagtggcaattactgaaagagcggaagcatattttagcg
atgctggttttctatggttttctggtagtaagtgtgttgctctcagaggacaaagactcg
gggctgcaccatttaaagctcaggcttccgctattgctgctgccccttggtgttggctta
ctagatctgcgccgagaattcattgataaggtacttctttctttcgccaccattacgtgt
ttggtgctcttcatttgtttgttgtcgagcatctacttttcaggtttttttgctaaacct
gaattcttgtacaatgatgccttgaccgtcatccttgagaggcagtccatttatattgcc
ttactcgtcaatatctccatcttcatctttgcccgcgccattttctactccaatcacaag
cataagggattgctgacgctgggcacacttttcttatatgggattgcctatctgttggcc
agtagaatcatgtttgcctggcttttggtggtcaccactggcttcagcttttactatgta
gttaagcaccgtaagcttttggaaggcttgaccttagtgcttggtttggtgattggcact
gtagtggttaacaaaacgctgccactcacttttaaccgttacaaggaagtagcctacagc
agtttcaagtttgaaaacatgggccgtgagagccactacaacatgcaaatcaccgaggac
caatggaatggcgtcaattttagattagccgtttggacctgcggaatggagctcttcaag
gagaacctggtgctaggcactggcttgggcgacaaggacgctgcgttaaaggaaaaatat
gccgagaagaacttccaatatgccatccaaacagaccggaacgtgcatagcaactacatt
gacatcctgtatagcttgggtttggtggggatgttgctatttgcattgagttggattggt
ttgccaattctgcaagctcttaaatcccaaaatggactggcagttctagtagttctcacc
tttgccgccgcatgggtttcagaggtctactttgctagaagcataggtgctacgttgact
ggtttctttttaccttttctccttttagttcttccgccagagaaagacagcatagtgttg
aatgattttgatgatttaaaataa
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