Rufibacter sp. DG15C: TH61_12885
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Entry
TH61_12885 CDS
T04326
Name
(GenBank) TonB-dependent receptor
Organism
rud
Rufibacter sp. DG15C
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Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl_3
CarboxypepD_reg
CarbopepD_reg_2
SdrD_B
SpaA
NOMO_3rd
Plug
phage_tail_N
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
AMM51895
UniProt:
A0A127B3Y0
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Position
3015702..3018209
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AA seq
835 aa
AA seq
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MKKRARILLGLLCFCLFCLGQAQAQGTTQAPAASAENGPGKISGTLTDSLTQAPLEFVTV
ALLKKGTTQSVGGTITDEKGRYTFNGLPVGDYSLAFSFIGYQTKTYPSVSITPDKPQVTV
NNVRLASSAKQLKEVKVEALRPTITQEADKIVVSIEGTALAAGRTAYDVLAKSPGVFVDQ
DGNIQLNGRGGVTVMMDGKLTYLSPSDLRTVLEGMSAENIKNIEIIANPTSKFDAEGTAG
ILNINLKKNEIQGLNGSVYGTYNTNFKQHGYSTGGNINFKTGKWNSFASIDQMQRIGNRE
GTFERVYDAEGGKIYFDQTANGQHKNQGPPTFRIGTDYSINDKHSVGALTAFNQNTVWVD
FITDSYMGDNRQNPETFINANNFLTNRFRSFTNNVHYQGKLDTVGTTLSADFDFVKISNA
GHSNFYNYYTDLSEASRPTTQDFLYTDTDNGFDIYSGKIDFVKPLNKISKFELGAKASRV
VSDNDSRFYFNNTGLVLDPNRTNHFIYDENIYAGYVTYSNKFGEKFQVQAGLRGEKTEST
GESPTMNQVNERSYFNLFPTLFVQQKVSENYQIGYNYSRRIQRPNYGNLNPFISYRDPFT
YTTGNPQLRPQYTHAVGITQTFRKDYILTLNYQYVKDVMSELPYLDVENATTIYTTGNVD
DLQNVSMTAITPIKIMKNWDTNNTLTLSYNEYTFLTNTDGQLNSDNNNQRVVNSQFLYML
QSSHNILLPMGIQLEVNAAGRGPGVSGLYKVGAMWWVHAGLKKSFLDKKLDLSVNVNDIF
RSYRLRFDTTIGQNINNFDQYLYQRTLGVTLRYKFSKGQKVEQRKTTSPDELNRT
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagcccgcattttgctgggcctgctatgcttttgccttttctgtttgggg
caagcacaggctcaaggcaccacccaggcgcccgccgcatctgctgagaatggtcccggg
aaaatctccggtacgctcacagattccctcacccaggctcccctagagtttgtcaccgtg
gccctgctcaagaagggcaccacccagtcggtgggcggtaccatcaccgatgagaaaggt
aggtacaccttcaacggtttgccggtgggtgactattccttggccttcagttttattggc
tatcaaaccaagacttaccccagcgtgagcattacaccagacaagccccaggtgacggtg
aacaacgtgcgactggcgtcctcagccaagcaattgaaagaggtgaaggtagaggcgttg
cgtcctaccatcacgcaggaggccgacaagattgtggtgagcattgaaggtacggcgctg
gccgcgggtagaaccgcctatgacgtactggccaagtcgccgggggtgtttgtggaccag
gacggtaacattcagttgaatggtaggggcggggtgaccgtgatgatggatggtaaactg
acgtacttatcgccttctgatttgcggaccgtgctagagggaatgtcggcggagaacatc
aagaacattgaaatcatcgccaaccccacctctaagtttgacgccgagggcacggcgggt
attctcaacatcaacctgaagaagaacgagatacagggcctgaacgggagcgtgtacggc
acctacaacaccaactttaaacagcacggctactctacgggcggcaacatcaactttaag
accggcaagtggaactcctttgccagcattgaccagatgcagcgcataggcaaccgcgaa
gggacgtttgagcgcgtctatgacgccgagggcggtaaaatctactttgaccagacggcc
aacggtcagcacaaaaaccagggtccgcccaccttccggattggtaccgactacagcatc
aatgacaagcacagcgtgggcgctttgaccgccttcaaccagaacacggtgtgggtggat
tttatcaccgactcttatatgggagataaccggcagaaccctgagacgttcatcaacgcc
aataacttcttgaccaaccggttcaggagctttaccaacaatgtccactaccaaggaaag
ctagacacggtgggcactacgctctcagctgattttgacttcgtgaaaatctccaacgcc
ggccactccaacttttacaattactacactgacctatccgaagcaagccgccctactacc
caggatttcctgtacaccgacaccgacaacggctttgacatctactccgggaagattgac
tttgtcaagcctttgaataaaataagcaagtttgagttaggcgctaaagccagccgcgtg
gtatctgacaatgactcacggttttacttcaacaacaccggactggtcttggaccctaac
agaaccaaccattttatctatgacgaaaacatctacgcggggtatgtgacctacagtaac
aagtttggcgaaaagtttcaggtgcaggcgggtttacgaggtgagaagaccgagtctacc
ggtgagtctcctaccatgaaccaggtaaatgaaagaagctactttaacctgttccccacc
ttgtttgtgcagcaaaaggtaagcgagaactatcagattggctacaactatagccgccgt
attcagcgccccaattatggcaacctgaacccgttcatcagctaccgtgacccattcacc
tacaccacgggtaacccgcaactgcgcccgcaatacacccacgccgtgggcattacgcag
acgttcaggaaagactacatcttgacgctcaactaccagtacgtgaaggacgtgatgtct
gagttgccgtatctggacgttgagaacgcgaccaccatttataccaccggcaacgtggat
gatttacagaacgtgagcatgacggccatcacgcccattaaaatcatgaagaactgggac
accaacaacacgctcacgctgtcctataatgagtacacgttcttgaccaacacagatggt
cagctgaactctgataacaacaaccagcgtgtggtcaactctcagtttttgtacatgctc
cagtcaagccacaacattctgctacccatgggcattcagctggaagtgaacgccgcaggc
cgtggaccaggagtctcaggtctgtacaaggtaggtgccatgtggtgggtgcacgctggt
cttaagaaaagcttcctggacaagaaactggacctgagcgtgaacgtgaacgatatcttc
agaagctaccgcttacgctttgacactaccattggccagaacatcaacaactttgaccag
tacctctaccagcgcacgttgggcgtgacgcttcgctacaaattcagcaaaggacagaag
gtagagcaacgcaaaaccaccagcccagacgagctgaacagaacatag
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