Rufibacter sp. DG15C: TH61_14560
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Entry
TH61_14560 CDS
T04326
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rud
Rufibacter sp. DG15C
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rud03032
]
TH61_14560
03400 DNA repair and recombination proteins [BR:
rud03400
]
TH61_14560
Enzymes [BR:
rud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TH61_14560
DNA replication proteins [BR:
rud03032
]
Prokaryotic type
DNA Topoisomerases
TH61_14560
DNA repair and recombination proteins [BR:
rud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TH61_14560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMM52160
UniProt:
A0A127B447
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All DBs
Position
3397754..3398821
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AA seq
355 aa
AA seq
DB search
MATSLTHAEIYADVAASAQQAGLRYLPDTKPGITRQAKGKKTEYFSAKGEKITDEKTLER
VQKLVIPPAWTDVWISPSPNGHIQATGRDVKGRKQYVYHPEWQQTRSVNKFGRMMAFAKA
LPGIREQVEKDLRLKKLEKRKILAIVVELLDHSFIRIGNKTYAKENKSFGLTTLRDRHAT
IEGDHLRLEFVGKKGIKHEISIKDRRLARLVKQCQEIPGYDLFQYYDEEGNRQTLESGDV
NEYLRSLSEEEFTAKDFRTWGGTVTMVECLETVLDQHPEIEKEASVKEAVKMVAKELGNT
PTVCSKYYIHPEVVNLFKQDKLIDYLRKHDAKKKKENPYLTRTEEFVMKMLQEVK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatccttgacgcacgccgaaatttacgctgacgtagccgcttctgcccagcag
gctggcttacgctacctgccagacaccaaaccgggcattaccaggcaagcaaaaggcaag
aaaaccgagtacttctctgccaaaggcgaaaagatcacggatgagaaaaccttggaacgg
gtgcaaaaactggttattccgccggcttggacggatgtctggatttcgccttcgcccaat
gggcacatacaagccacgggccgggacgtgaaaggccgcaagcagtacgtgtaccaccca
gagtggcagcagaccaggagcgtcaataagtttggccgcatgatggcttttgcaaaggcc
ttaccgggtattagggagcaggttgaaaaagacctcaggctgaagaaattggagaagcgt
aaaattttggccattgtggttgaactgctagaccattcttttattaggataggcaacaag
acctacgccaaggaaaacaaatccttcgggctgaccaccttgcgcgaccgccacgccacc
attgaaggcgaccacctgcggttggagtttgtgggcaagaagggaatcaagcatgagatc
agcatcaaagaccgaagactggccagattggttaagcagtgccaggagataccggggtat
gacctgttccaatattatgacgaggaaggcaaccgacagaccctggaatctggcgacgtg
aatgagtacctgcgttctctaagcgaggaagagtttacggccaaggacttcaggacttgg
ggcggcacggtcaccatggtagaatgcctggaaacggttttagaccagcaccccgaaatt
gagaaggaagcctctgtgaaggaagcggtgaaaatggtagccaaagagctcggcaacacg
cccaccgtgtgtagcaaatactacattcacccagaggtagtcaacctgtttaagcaagac
aagctgattgattatttgcgcaagcatgatgctaaaaagaagaaagagaatccctatctt
acccgtaccgaagagtttgtcatgaagatgctgcaagaagtgaaatag
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