Rufibacter sp. DG15C: TH61_15375
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Entry
TH61_15375 CDS
T04326
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TH61_15375 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rud03019
]
TH61_15375 (groEL)
03110 Chaperones and folding catalysts [BR:
rud03110
]
TH61_15375 (groEL)
03029 Mitochondrial biogenesis [BR:
rud03029
]
TH61_15375 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rud04147
]
TH61_15375 (groEL)
Enzymes [BR:
rud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TH61_15375 (groEL)
Messenger RNA biogenesis [BR:
rud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TH61_15375 (groEL)
Chaperones and folding catalysts [BR:
rud03110
]
Heat shock proteins
HSP60 / Chaperonin
TH61_15375 (groEL)
Mitochondrial biogenesis [BR:
rud03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TH61_15375 (groEL)
Exosome [BR:
rud04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TH61_15375 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
TH61_15375 (groEL)
Exosomal proteins of breast cancer cells
TH61_15375 (groEL)
Exosomal proteins of colorectal cancer cells
TH61_15375 (groEL)
Exosomal proteins of bladder cancer cells
TH61_15375 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Pho88
Motif
Other DBs
NCBI-ProteinID:
AMM52298
UniProt:
A0A127B4S2
LinkDB
All DBs
Position
3582942..3584585
Genome browser
AA seq
547 aa
AA seq
DB search
MASKNITFDIEARNKIKKGVDTLANAVKVTLGPKGRNVIIDKKFGAPSITKDGVTVAKEI
ELKDAVENMGAQLVKEVASKTADMAGDGTTTATVLAQAIYTAGSKNVAAGANPMDLKRGI
DKAVTKVVANLKEQSKKIENSSEIAQVGTISANNDVEIGQMIADAMDKVGKDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNPEKMEAEFENAYILIYDKKVSTMKELLPVLEQV
VQTGKALVIISEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYKLDNATLDYLGQAERIIIDKDNTTIVNGRGEKDAISGRVNEIKSQIEKTTSDY
DREKLQERLAKLSGGVAILYIGASTEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
RAIEALNDVDTRNEDEKTGVQIIRTALESPLRTIVANAGGEGSVIVNEVRAGQADYGYNA
RDDKFENMFAAGIIDPTKVTRLALENAASVAALLLTTECVIADEPEEGGAAAGGGMPGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaagaacattaccttcgacatcgaagcccgtaacaaaatcaaaaaaggcgtt
gacactttagccaacgctgtgaaagtaaccttgggccctaaaggccgcaacgtgatcatt
gacaagaaatttggcgcgcctagcatcaccaaagacggtgtgacggttgccaaagagatt
gaattgaaagacgccgttgagaacatgggtgctcaattggtgaaagaagtagcctctaaa
accgccgacatggctggtgatggtactactactgccactgttttggcccaggctatctac
acggccggttctaagaacgtggcggccggtgccaacccaatggacctgaagcgcggtatt
gacaaggccgttaccaaagtggtagctaacctgaaggagcagtctaagaagattgaaaac
tcttctgaaattgcccaagtaggtactatctctgccaataatgacgtggaaatcgggcag
atgattgccgatgccatggacaaagtgggtaaagacggtgtgatcacggttgaggaagcc
aaaggtactgagaccgaggtgaagactgtagaaggtatgcagtttgaccgcggttacctg
tctccttacttcgtgaccaacccagagaaaatggaagccgagtttgagaacgcttacatt
ttgatttatgacaagaaggtttctaccatgaaagaattgcttccagtattggagcaagtg
gttcagactggtaaagctttagtaatcatctctgaagacgtagacggcgaagcccttgct
acattggtagtaaacaaactgcgtggttctttgaaaattgctgctgtgaaggcgccaggc
tttggtgaccgcagaaaagccatgttagaggacatcgcaatcttgacgggtggtactgtt
atctctgaggagcgtggttacaaactggacaacgccactttggactaccttggtcaggcg
gagcgtatcatcattgacaaagacaacactaccatcgtgaatggtcgtggcgagaaagat
gctatctctggtcgtgtgaacgagatcaagtcgcagattgagaagactacctctgactat
gacagagagaagttgcaagagcgtctggctaaattgtctggtggtgtggctatcctttac
attggtgcttctactgaagtagagatgaaagagaagaaagaccgtgtggatgatgcctta
cacgctaccagagctgccgtagaagaaggtattgtagctggtggtggtgttgccttgatc
agagccattgaggccttgaacgacgtagacacccgcaacgaagatgagaagactggtgtg
cagatcattcgcacggcgcttgagtctccattgagaacgatcgtagccaatgctggtggt
gaaggttctgtgattgtaaacgaagtacgtgccggtcaggctgactacggttacaacgcc
cgcgacgacaagtttgagaacatgtttgccgctggtatcattgacccaaccaaagtaacg
cgtcttgctcttgagaacgctgcttctgtggcggccttgttgctgaccactgaatgtgtg
attgctgatgagcctgaagaaggtggcgcagctgccggtggtggaatgccaggcggtatg
ggcggcatgggtggcatgatgtaa
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