KEGG   Rufibacter sp. DG15C: TH61_15555
Entry
TH61_15555        CDS       T04326                                 
Name
(GenBank) hypothetical protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rud  Rufibacter sp. DG15C
Brite
KEGG Orthology (KO) [BR:rud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rud03016]
    TH61_15555
Enzymes [BR:rud01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     TH61_15555
Transfer RNA biogenesis [BR:rud03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    TH61_15555
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AMM52319
UniProt: A0A127B682
LinkDB
Position
complement(3619386..3619937)
AA seq 183 aa
MEDTLRLFVAVPLPQTLKDYLVQARGVYDVPGVRAVPEENLHLTLFFIGNVPASQQTFIL
EELKRISEVNDPFTLILEQLEPGPKPKSPRLVWVRFQENEAFTNISRALTQALAATPPKQ
EKFIPHITVCRLKKDARPAKNLPIYKPEREIAFPVQSFALWKSTLGSPHPIYTVVQEFAL
RKK
NT seq 552 nt   +upstreamnt  +downstreamnt
atggaagacaccctccgcctttttgttgccgttcccttgccccaaacgctgaaggactat
ttagtgcaggcacgaggtgtgtacgatgtcccgggcgtacgtgcagtgcctgaggaaaac
ctgcacctgacgctattttttattggaaacgtgcctgcctctcagcaaacttttattcta
gaggaattaaagaggatctcagaagtcaatgatccttttaccttgatattagagcagttg
gagcccggccctaaacccaaatccccgaggctggtttgggttcggtttcaagaaaatgag
gcgttcacaaatattagcagggctttgacccaagctttggcagcaactccgcctaagcaa
gagaaattcattccgcatattactgtgtgtaggttaaaaaaagacgcccggcccgccaaa
aacctacccatttataaacctgagagagaaatagcgtttccggttcagtcctttgccctt
tggaagtctaccttaggctcgccgcatccgatatacacggtagtacaagaattcgcgctg
cgcaagaaataa

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