Rufibacter sp. DG15C: TH61_16025
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Entry
TH61_16025 CDS
T04326
Name
(GenBank) hypothetical protein
KO
K02014
iron complex outermembrane recepter protein
Organism
rud
Rufibacter sp. DG15C
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rud02000
]
TH61_16025
Transporters [BR:
rud02000
]
Other transporters
Pores ion channels [TC:
1
]
TH61_16025
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
Plug
EMC7_beta-sandw
NOMO1-like_2nd
fn3_3
SpaA
SdrD_B
NOMO_3rd
CILP
ATRX_C
Motif
Other DBs
NCBI-ProteinID:
AMM53001
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All DBs
Position
3729844..3732240
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AA seq
798 aa
AA seq
DB search
MSPKAFFVTILFFLCSLSLIAQNNALRGRVTSADGEPAAYVSVLLKEANKSAITNEEGAF
TFKNIPAGTYTLIATCIGYEAQEKLVNVNAGQTTIQDFLVNKTSTQLQEVTVTGRQSINE
KPVAIGKIAINPLDLPQSTTIIGAEVLEKQQVQTLGEVLQQVNGVYQMGNTGGTQEEIAG
RGFAFGSSNTFKNGSRFNNGIMPEMSSLERVEVLKGSNAILFGNVAAGGVLNLVTKKPKF
EHGGEISMRAGSYDYYKPTVDVYGSINNSDQFAYRLNTTYLNAGSFRDQVKAERFYINPS
VLFKASAKTEILLEGDYMHDTRTPDYGVGAINYAITNLPRSTYLGVSFAKNEVEQRSAMA
TITHRLNDNFEIRSTNSFQNYNVALLTTSRPTNFVIDAEGRSNGDLKRGLQRSASDEKYY
LTQLDFIGKLTTGSVKHTLLVGGDADKYDTEAPVFNAIAAYDVINIYNLNADNQRKDIPD
FTTKPYNTKTVSNRFGLYAQDLISVSEKLKVLAGLRYSAIDTEGESTVTDPSTKKEVLGT
SNSNDYAFSPRAGVVFQPTQNMSLFVSYANSFTPNTGTDVNLKPLDPSITDQYEVGLKNE
LLNGLLSANLTAYQIKNSNFAQRALFLADGVTANTNNNIKELAGEVTSQGIELDLMSKPI
QGWSLIGGYSYNDTRYTKSNTYAKNERLRYNPSHTANASVFYAFQKAELSGLNLGATAFY
VGDRLAGRNRTDANPTYKLIALPNYMMFDAHVGYAYQRVSLRLKMTNLLNKLSYNAHDDN
SINPIAPRQFVTTIAYKL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atctccccaaaagccttctttgttaccatcctctttttcctatgttccctctccttgatt
gcgcagaacaatgcattgcgtgggcgggttacctcagcagatggtgagcctgccgcctat
gtgtcggtgttattaaaagaagcgaacaagtcagctatcaccaatgaagaaggggctttc
actttcaagaatattcctgcgggcacctatacccttattgccacttgcattggctatgag
gcccaagaaaagctggtgaatgtgaacgcgggtcaaaccaccatacaagattttcttgta
aacaaaacctcaacccaattgcaagaggtgacggtaaccggcagacagtctattaacgag
aagccggttgccattggtaaaattgccatcaatcctcttgatctgccgcaaagtaccacc
atcattggagccgaagtattggaaaaacagcaggttcagaccctgggtgaagtcttacaa
caggtgaatggtgtctaccagatgggcaataccggaggcacccaggaagagattgccggc
cgcggcttcgcgtttgggagcagcaacaccttcaaaaacggatcgcggttcaacaacggc
atcatgcccgagatgtccagcctggagcgcgtagaagtcttgaaaggaagcaatgccatc
ttgttcggcaacgtggccgccggcggtgtcttgaacctggtgaccaaaaaaccgaagttt
gagcacggcggtgaaatatccatgcgggccggaagctacgactactataagccaactgtg
gacgtgtatggctccatcaataacagcgaccagttcgcttatcgccttaacaccacgtat
ttaaacgctggtagttttagagaccaagtaaaagcagaacgcttctacatcaacccttcg
gtcttattcaaggccagcgctaaaacagaaatcttgctggaaggcgattatatgcatgac
acgcgcacgccagactacggggtgggtgccatcaactatgccatcaccaacttgccgcgc
agcacgtatttgggcgtttccttcgccaaaaacgaggtagaacagcgcagtgccatggct
accattacgcaccgcctaaacgacaactttgagatacgaagcaccaactctttccagaat
tacaatgtggctttgctgaccacttcccgccctaccaattttgtgattgacgccgaagga
aggtcaaacggcgacctgaaaagaggtttgcaacgctctgcctcagatgaaaaatactac
ctaacccaactggactttatcggcaaattaacgaccggttctgtaaaacacaccttattg
gttggtggcgacgctgataagtatgacacagaggctcccgtgtttaacgccatagccgcc
tatgatgtcatcaacatctacaacctgaacgcagacaaccagcgcaaagacataccagac
tttaccaccaagccctacaacacaaaaaccgtttctaaccgcttcgggttgtatgcgcag
gatttgatcagtgtatctgagaagctgaaagtgttggcgggcttacgttacagcgccatt
gacaccgaaggagaatctacggtcaccgacccatctaccaagaaagaagtgctgggcacc
agcaacagcaatgactacgccttcagcccaagagcgggagtggtttttcagcctacgcag
aatatgtctttgtttgtcagctatgccaactcgtttacgcctaacaccgggacagacgtt
aacctaaagccccttgacccttccatcacagaccagtatgaagttgggttgaagaacgaa
ttgctgaacggtttactttctgccaacctaacggcctaccaaatcaagaacagcaacttt
gcgcaacgagccttgttcttagcagatggtgtaaccgccaataccaacaacaacatcaaa
gaattggccggcgaggtaactagtcaaggcattgagttggatctaatgagcaaaccaata
caaggttggtcattaattggaggctacagctacaatgacacccgctacaccaaaagcaac
acctacgccaaaaacgagcgcctgcgctacaacccatctcatacggccaacgccagcgtg
ttctatgccttccagaaggctgagttaagtggtttgaacttaggtgcaacggccttttat
gtaggtgaccggttggccggccgaaaccgaacagatgccaaccccacgtacaaactgata
gccctgcctaattacatgatgtttgatgcccacgtaggctatgcttatcagcgggtgtcc
cttcgcctaaaaatgaccaacctcctgaacaaactgagctataacgcccatgatgacaac
agcatcaatccaatcgctccaagacagtttgtaactacaattgcctacaagctttaa
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