Rufibacter sp. DG15C: TH61_16695
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Entry
TH61_16695 CDS
T04326
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud00300
Lysine biosynthesis
rud00470
D-Amino acid metabolism
rud01100
Metabolic pathways
rud01110
Biosynthesis of secondary metabolites
rud01120
Microbial metabolism in diverse environments
rud01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TH61_16695
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TH61_16695
Enzymes [BR:
rud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TH61_16695
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
TssR_VWA
Motif
Other DBs
NCBI-ProteinID:
AMM52493
UniProt:
A0A127B4V5
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All DBs
Position
3892939..3894084
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AA seq
381 aa
AA seq
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MLQNHLSEISQHPTPFYLYDLGLLRQTLASAQFEAQKYGYQVHYALKANANAPILAEVLA
HGFGADCVSGNEVQRALDAGFTPEHVVFAGVGKSDVEINLALDNNIFCFNCESSQELEVI
NELAAAKGKVAQVALRINPNVDAYTHKNITTGLEENKFGINAWELDALLPQLAQWTNLKL
IGLHFHIGSQITDLRAFENLCTRVNEIQQWFEDKGYTFPHLNVGGGLGVDYKNPDTNTIA
DFANYFAIFHRLLEKREGQQVHFELGRALVAASGTLVSKVLYMKHGQKTNFVILDAGMTE
LMRPALYQAYHHIDNLSSTLPAQTYDVVGPICESTDSFSKAIQLPETKRGDLMAIRTAGA
YGEVMANQYNLRNRVQAVYVN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagaaccatctttctgagataagccagcaccctacgcctttttacttgtatgac
cttggcctgttgcgccaaaccttggcctcggcgcagtttgaagcccagaaatacgggtac
caggtgcactacgccctcaaagccaatgccaacgcgcctattctggcagaagtgcttgcc
cacggtttcggggccgactgcgtgagcggcaacgaagtgcaacgtgccttggatgccggc
ttcacgccggagcatgtggtgtttgccggagtgggcaagtctgacgttgaaatcaacctg
gcgcttgacaacaatatcttttgctttaactgcgagtctagccaggagctggaagtcatt
aatgaattggcggccgccaaaggcaaagtggcccaggtggccctgcgcattaacccgaac
gtagacgcctatacgcacaagaacattaccaccggtctggaagaaaacaagttcgggata
aacgcctgggaactggacgccttattaccgcagcttgcccaatggaccaacttgaaactg
attggcctgcacttccacatcgggtcgcagattacagatttgcgggcctttgagaacctg
tgcacgcgcgtgaatgagatacagcagtggtttgaggacaagggctatacgtttccgcat
ttgaatgtgggcggtggcctgggcgtggattataagaacccagacaccaacaccattgca
gactttgccaattactttgccatcttccacaggttgctggaaaagcgcgaaggccagcag
gtgcattttgaattgggccgtgcgctggtagccgccagcggaaccttggtttctaaggtg
ctctacatgaagcacggccaaaaaaccaactttgtgattctagacgccggcatgacagaa
ttgatgcgccctgccttgtatcaggcctatcatcacatagacaacctgagcagcacgttg
cccgcccagacctatgacgtggtaggacccatctgcgagtctacagacagtttctctaaa
gccatccagctgccagaaaccaaacgcggcgacttaatggccattagaaccgccggtgcc
tacggcgaggtgatggccaaccaatacaacctgcgcaaccgtgtacaagcggtgtatgta
aattaa
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