Rufibacter sp. DG15C: TH61_16725
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Entry
TH61_16725 CDS
T04326
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rud
Rufibacter sp. DG15C
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rud03016
]
TH61_16725
Enzymes [BR:
rud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
TH61_16725
Transfer RNA biogenesis [BR:
rud03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
TH61_16725
Prokaryotic type
TH61_16725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Glyco_hydro_78_N
Motif
Other DBs
NCBI-ProteinID:
AMM52498
LinkDB
All DBs
Position
3899838..3900755
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AA seq
305 aa
AA seq
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MDFELKILGSSSATPSFDRHHTAQLLAIGNQLNLIDCGEGTQMQLMRYKVKHQRICNIFI
SHLHGDHYFGLPGLLSTMHLQQRTASLNLFGPKGLAEILSLQFKYAGTQLPYKINFHEVD
TTVSRKIFEDKTITVHTLPMQHRINCCGYLFKEKQKPRHLLKSKLPAFLTPPQLVRLKWG
EDVLDEAGKILVRNADVTTNPKHSRSYAYCSDTKYKEDILPLIKGVDLLYHESTFLSDMT
QRADYTFHSTAQQAATLALKAQVKRLLIGHFSARYKDLTPLLAEAQAVFPNTNLAVEGKT
INVLE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggactttgagttaaaaatccttggcagttcttctgctacgccctcttttgaccgacat
cataccgcccaacttttggcaattggcaatcaattaaacctgattgattgcggagaaggt
acacaaatgcagctgatgcgttacaaagtaaagcatcagcgcatttgtaacatcttcatt
agtcacctccacggtgaccattattttggcttacccggtttgctgtctaccatgcatttg
cagcagcgcaccgcctccctcaacctctttggacctaaaggcttagctgagattctatct
ctccagtttaagtacgccggcacccagcttccttacaagatcaacttccatgaagtagac
accaccgtctcccggaagatttttgaggacaaaaccatcacggtgcacaccttgcccatg
caacaccgcatcaactgctgtggctacctgttcaaggaaaagcaaaagccccgccacctg
cttaaaagcaaacttcccgccttcttgacgccgcctcagctggtgcgcttgaaatggggt
gaggatgttttggatgaagccggtaagatattggtgcggaacgcagatgtaaccaccaat
cccaagcatagccgcagttacgcctactgctcagacaccaagtacaaagaagatattctg
cccctgattaaaggagtggatctgctctaccatgagtctacgttcctgagtgacatgacc
cagcgcgcggactacacctttcatagtacggctcagcaggcggctacactggcgttgaag
gctcaggtaaagcgtctgctcatcggccatttctcggcccgctacaaggacttaaccccg
cttctagcagaggcgcaggccgtatttccgaatacgaatctggcagttgaaggaaagact
attaatgtcttggagtag
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