Rufibacter radiotolerans: TH63_01230
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Entry
TH63_01230 CDS
T03996
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ruf
Rufibacter radiotolerans
Pathway
ruf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TH63_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ruf03021
]
TH63_01230
03400 DNA repair and recombination proteins [BR:
ruf03400
]
TH63_01230
Enzymes [BR:
ruf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TH63_01230
Transcription machinery [BR:
ruf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TH63_01230
DNA repair and recombination proteins [BR:
ruf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TH63_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AKQ44570
UniProt:
A0A0H4VG64
LinkDB
All DBs
Position
285032..286021
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFNGQFEFKPLEKGYGVTIGNALRRILLSSLEGFAISSIRIP
SVLHEFSTIEGVVEDVSEIILNLKMVRFKKIGDLVDDKITVSISKQDTFTAGDINKFSGS
FQVLNPDLVICHLDPEASFEIELTIQKGRGYVPAEENKPVDQVFGQISIDAIFTPVKNVK
FSVENTRVEQKTDYERLLLEITTDGSIHPEDALKGAANILIQHFMLFSDNTMTFETVKPE
EEEAVDEEMLHMRKVLKTPLHDMDLSVRAYNCLKAADIRTLGDLVQLDLSDMMKFRNFGK
KSLTELENLVAEKGLNFGMDISKYKLEED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattagcctttcaaatgccggagaaagtcgtgatggagaaatccgatgacttt
aatgggcagtttgaatttaagccgctagaaaagggctatggtgttaccattgggaatgcg
ctgagaagaattcttctctcctcattggaaggctttgccatctccagcatccgtattcct
agtgtgctccatgagttctctaccattgaaggtgtggttgaagatgtctctgagattatc
ctgaacctgaaaatggttcgcttcaagaagattggtgacctggttgatgataagatcact
gttagcatcagcaaacaagatacctttacggccggggacattaacaaattctctggttcg
ttccaggtattgaaccctgacctggtgatttgtcacctagaccctgaagcctcttttgaa
attgagttaaccattcagaagggtagaggatatgtgcctgcagaagaaaacaagcctgta
gaccaggtgttcggccaaatttctattgatgctattttcactcctgtaaagaatgtgaaa
ttcagcgtggagaacactcgggtggagcagaaaactgactacgagcgtctattgttagaa
attaccactgatggatcaattcatccggaagatgccttgaaaggcgctgccaatatcttg
atccagcactttatgctgttctctgacaacaccatgacttttgaaacagtgaagcctgaa
gaggaagaagctgtggacgaagaaatgctgcacatgagaaaagtgctgaagacccctctg
catgacatggatctttccgttcgcgcatacaactgcttaaaggcagcagatatcagaacg
cttggagatttagttcagctggatctttcagacatgatgaaattccgtaactttggcaaa
aagtcattaactgagttggaaaacctggttgctgaaaaaggccttaacttcgggatggat
atctccaagtacaaattagaagaagattag
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