Rufibacter radiotolerans: TH63_01360
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Entry
TH63_01360 CDS
T03996
Name
(GenBank) deoxyribonuclease HsdR
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
ruf
Rufibacter radiotolerans
Pathway
ruf01503
Cationic antimicrobial peptide (CAMP) resistance
ruf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TH63_01360
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
TH63_01360
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ruf01002
]
TH63_01360
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ruf03110
]
TH63_01360
Enzymes [BR:
ruf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
TH63_01360
Peptidases and inhibitors [BR:
ruf01002
]
Serine peptidases
Family S1: chymotrypsin family
TH63_01360
Chaperones and folding catalysts [BR:
ruf03110
]
Other chaperones and cochaperones
DegP / HtrA
TH63_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
PDZ_1
PDZ_Tricorn
Motif
Other DBs
NCBI-ProteinID:
AKQ44588
UniProt:
A0A0H4VH50
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All DBs
Position
319402..320895
Genome browser
AA seq
497 aa
AA seq
DB search
MKTKQLMFGLLLSAMVGGGVGVGSYKLLEDDTPAAGQQLPNTNVRYTSAMRSSTVTVPEG
INFVTSAELVTPAVVHVTTEYNVQASRGQSQIHPFLRDFFGEEFEGYQQRPQGPAQGSGS
GVIIASNGYIVTNNHVIDRADKIQVILDDKRTFEATLVGTDPNTDIALLKIGAENLPALR
YGNSDNVRVGEWVLAVGNPFNLNSTVTAGIVSAKGRNVGILQAAGNMSVESFIQTDAAVN
PGNSGGALVNLNGDLVGINTAIASQTGTFSGYSFAVPSSIVSKVVDDLIKYGEVQRALLG
VQMQEVDSQLAKEKNLKTLNGVYVAEFSEGSAAKAAGLEKGDVITEINGVKINTGAQLQE
QVTRYRPGDKIKVNYLRSGSNKTATVTLRNSKGSTEIVKRDPKASKSMTIDGAKFEAASK
QDLNKLDIPGGVQINGVEGSAFAETGMRDGFIITSIDKNPMNTPEDVQKVLKTTRRGGLL
IEGVYPDGRRAYYAIGR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaacaattaatgtttggtttgttgctttccgctatggtaggtggaggtgtg
ggcgttggtagctacaaactactggaagatgatacccctgctgccgggcaacaattaccc
aataccaatgtgcggtataccagtgccatgcgctcgtctaccgtaaccgtaccagaagga
atcaattttgtgacctccgctgaactggtaacaccggcggtggtgcacgtgaccaccgag
tacaacgtacaggccagccgtggccaaagccagatccatccgttcctgcgcgatttcttc
ggagaagaatttgaaggctaccagcagcgtccgcagggcccggcccagggatcagggtct
ggggtgatcattgcctctaacggctatattgtcaccaataaccacgtgattgaccgcgcc
gataagattcaggtgatcctggatgacaaacgcacctttgaggccactttggtaggtaca
gaccctaacacagacattgcgcttctaaaaattggcgccgagaacctgccggccctgcgc
tacggcaactcagataatgtgcgcgtaggcgagtgggtgctggcggtgggtaaccccttc
aacctgaactctaccgtgaccgcgggtattgtaagtgccaaaggccggaacgtaggtatt
ctgcaggccgccggcaatatgagcgtggagtcctttattcagaccgatgctgcggtaaac
cctggtaacagcgggggcgccttggtgaacctgaacggagacctggtgggtatcaatacc
gccatcgcctcgcagaccggtaccttctcgggttattcctttgccgtgccgtcctctatt
gtgagcaaggtggtagatgacctcatcaaatatggcgaggtacagcgcgcgctcctgggg
gtgcagatgcaggaggtagattcccaactggccaaagaaaagaacctgaaaaccctgaac
ggggtgtacgtggccgagttctctgaaggcagcgccgccaaggccgccggcttggagaaa
ggcgacgtgatcaccgagattaacggcgtgaagatcaataccggtgcccagttgcaggag
caggtaacccgttaccgccccggcgacaagatcaaggtaaattacctgcgctccggaagc
aacaaaacggcaaccgttaccctgcgtaactccaaaggcagcaccgagattgtgaagcgc
gaccctaaagccagcaaatctatgaccatagacggggctaagtttgaggccgccagcaag
caggatctgaacaaactggatatcccgggtggggtgcagatcaatggggtggaaggaagc
gcctttgccgagaccggcatgcgcgatggcttcattatcaccagcattgacaagaaccca
atgaacacccccgaagacgttcaaaaagtactaaaaaccaccagacgtggcggactgttg
attgaaggggtctacccagacgggcgccgggcgtattacgccattggccgctag
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