Rufibacter radiotolerans: TH63_02240
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Entry
TH63_02240 CDS
T03996
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ruf
Rufibacter radiotolerans
Pathway
ruf02024
Quorum sensing
ruf03060
Protein export
ruf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TH63_02240
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TH63_02240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TH63_02240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ruf02044
]
TH63_02240
Secretion system [BR:
ruf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TH63_02240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AKQ44711
UniProt:
A0A0H4W2P1
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All DBs
Position
complement(530980..533964)
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AA seq
994 aa
AA seq
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MRNKGFILFLTVIVSALCLYYLSFSLVSRGVEKDAAQFATDANGNVDHYKKQSYLDSVWK
APVFNFLGAEYTYQQVKESELGLGLDLKGGMHVTLEISPVEIIRAMAGNRKDPAFEQAIA
RAQKLQVNSQENFVDLFYRSFRELQPNTKLATIFANSTTRSLSYNSSDKEVLAEINREVN
DAVARSFNILRTRIDKFGVNQPNIQHLKGTNRIQIELPGVDNPERVRKLLQGTANLEFWE
VWNIEEYGPYFTQMNDYLVKQEAANKLKGTSSASLASAADTSASSLTSAAGKDTSALAAQ
LSKPADSAAAKKDSINPNQSSLLARLFTTLPGGLGTNVRDTARVNALFNTPEIKAIFPQN
LKFLWGVKPIVSNDGSEFLELYAIKRGRDGKAPLTGEYISDARQDYDQSGRPEITMGMNA
AGSKKWQRLTGDNIGRQVAIVLDNYVYSAPTVQSEISGGNSSISGSFSIEEAQDLANILK
AGKMPAPTRIVEEAIVGPSLGQEAINQGLLSSLAGMVLVVLFMFAYYSKGGLIANIALFF
NIFFIIGVLAQFGTALTLPGIAGMILTMGMSVDANVLIFERIKEEMALGLNVKEAIKKGY
DKAFSSIFDSNVTTLLAGIILYFFGSGPVKGFAITLMIGIATSFFTAVYISRLLIEWMTS
GKNANNLSLETSVSKNWFKNIKFDILGNRKKAYIFSSIFILVGIAAVFIKGELPLGVDFR
GGRSYVVDFKNAVPASDVRSALDDEFKGAGTEVKTYGASNRLKVTTSYLAQEESAEADEN
VKNALVQGLQQYQGENPTIISSAKVGATMADDIQKTAVVAVLLAFAGIFIYLAFRFSRWQ
YSLGGVIALIHDVLIVFSAFTIANLFGLSFEMDQVFIASILTIIGYSINDTVVVFDRIRE
YTNENPRAKFRDIVNPALNSTFGRTIITNLTVLLVVIVLFIFGGETLRGFSFAMLIGSLT
GTYSTLFIASPIVVDTTKIDREKLVAVKPVVASK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacaaaggatttattctgttcctgacggtgatcgtatcggcgctatgcctgtac
tatctctcgttctccctggtctccagaggcgttgaaaaagacgctgcccagtttgccact
gatgctaatggcaatgtagaccactacaaaaaacaaagctacctggactctgtctggaaa
gcccctgtgttcaacttccttggtgctgagtacacctaccagcaggtaaaggaaagcgaa
ctgggccttggccttgacttaaaaggcggtatgcacgtaacgctggagatttctccggta
gagatcatcagagccatggcgggcaaccgcaaagacccggcgtttgagcaggctattgcc
agagcgcagaaactgcaggttaacagccaggagaactttgtagacctgttctatcgctct
ttccgggagttgcagcctaacactaaactggctaccatcttcgccaacagcaccacccgt
agcctgagctacaactcctcagacaaagaggttctggcagagatcaaccgtgaggtgaat
gacgccgtggctcgttccttcaacatcctgcgtacccgtattgataaattcggggtgaac
cagcccaacatccagcatctgaaaggcactaaccgcatccagatagagttgccaggtgta
gacaacccagagcgggttcgtaaattattgcagggaactgccaacctggagttctgggaa
gtatggaacattgaagaatatggtccttatttcacgcagatgaatgactacctggtaaaa
caggaagccgccaacaaactgaaaggcacttcttctgcctccctggcctctgccgctgac
acttctgccagttccttaacttctgccgccggcaaagacacttcggccctggccgcccag
ttaagcaagcccgccgatagcgccgctgccaagaaagactccatcaaccctaaccaaagc
tcactgctggcccgtctgttcactacccttccgggtggtttaggcaccaacgtacgtgac
acggccagagtgaacgccctgttcaacactcctgagatcaaagccatcttcccgcagaac
cttaagttcctttggggcgtgaagccaattgtctctaatgacggttctgagttcctggaa
ctgtatgctatcaaaagaggccgtgacggcaaagcgcctttgaccggtgagtacatctct
gatgcccgccaggattatgaccagtctggccgtcctgagatcaccatgggcatgaacgcc
gccggttctaagaaatggcagcgcctgaccggtgacaacattggtcgccaagtggctatc
gttctggataactatgtatactctgcccctacggtacagagcgaaatcagcggaggaaac
tcttctatctctggttctttctctattgaagaagcccaggatttggcaaacatcttgaag
gccggtaaaatgcctgcccctacccgtattgtggaagaggccattgtaggtccgtctttg
ggtcaggaagccatcaaccaaggcttgctttcttctcttgccggtatggtgctggtagta
ttgttcatgtttgcctattacagcaaaggtggccttattgctaacattgccctgttcttc
aacatcttcttcatcattggggtattagcccaatttggaacggcccttaccttaccaggt
attgccggtatgattttaaccatgggtatgtctgtggatgcgaacgtactgatctttgag
cgtatcaaagaggaaatggcccttggcttaaacgtgaaggaagccattaagaaaggatat
gacaaagcgttcagctccatttttgactccaacgtgactaccttattggcgggtatcatc
ctgtacttcttcgggtctggtccggtgaaagggtttgccattaccttgatgattggtatt
gctacctctttctttacagcggtttatatctcccgtttactgattgagtggatgacttcc
ggtaaaaatgccaacaatctgtctctggaaactagcgtatctaaaaactggtttaagaac
atcaagtttgacattctgggcaaccgtaagaaagcctacatcttctcctctatctttatt
ctggtaggtattgcggcggtgttcattaaaggcgaattgccgttgggcgtagactttaga
ggtggccgttcttatgtggttgacttcaaaaacgccgttcctgcttctgatgtacgttct
gccctggatgatgagttcaaaggcgctggtacagaggtgaaaacctacggtgcttctaac
cgcctgaaggtaaccaccagttacctggcccaggaagagtctgccgaagccgatgaaaac
gtgaaaaacgcgttggtacagggcttgcagcaataccagggagagaaccctaccattatt
agctccgctaaggtgggtgctaccatggcagatgacattcagaagacagctgttgtggcg
gtattactggcctttgccggtatcttcatctacctggcattccgtttcagccgctggcag
tacagcttgggcggggtaatagccttgatccacgacgttttgatcgtgttctcggccttc
actattgctaacctgttcgggctttcttttgagatggaccaggtattcatcgcttctatt
cttaccattattggttactctatcaatgacaccgtggtagtatttgaccgtatcagggaa
tacaccaatgagaacccacgcgctaagttccgtgacattgtgaaccctgcgttgaacagc
accttcgggcgtaccatcatcaccaacttaacggtattactggtagtgattgtgctcttc
atctttggtggtgagacccttagaggcttctccttcgcgatgttgattggttctttgacc
ggtacctactctaccctgtttattgcctcgccaattgtagtggacaccactaaaattgac
agagagaaactggtggcggtaaaaccggtagtggcttctaaataa
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