Rufibacter radiotolerans: TH63_03435
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Entry
TH63_03435 CDS
T03996
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ruf
Rufibacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruf03400
]
TH63_03435
DNA repair and recombination proteins [BR:
ruf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TH63_03435
Archaeal homologous recombinant proteins
TH63_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_ATPase
ABC_tran
NTPase_1
AAA_21
SMC_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKQ44888
UniProt:
A0A0H4VHS5
LinkDB
All DBs
Position
complement(802039..805707)
Genome browser
AA seq
1222 aa
AA seq
DB search
MKIASVRFLNLNSLQGEHHIRFNEPPLSESGLFAITGPTGAGKTTILDAITVALYGQVPR
HGRDVAEIMTRHTGECWSEVEFEAQGKFYRAKWILRRSRGKADGKLQSPVMELMDADTHE
ILESRLSETRQRIIDLCGLDFQQFLRSVMLSQGDFTRFLKASESERSELLEKLTDTRIYS
QISIAAYEKAKAEKQKLQDLERLLQLDQLLPEEARAALAQEVTDLKAAARLANQQIQQHL
HQQTWLDHLSKLTQKESSLSAQLTSAHTAQQAWQPQQEKLQRHEQAQPFQSELARLDQVQ
RQGQAVAQAVTALQQQIPTQEKQVATNLQTTTAARTAHAQAQQTLTEAEPRLDQVLQQDT
HLAAQQAQYTKDEQATAQLQTQVRQLAAALEQQQTQQQKLINEGKQLNDWLKEHAQDEEL
VQTLHDGKAEVKNLEEVRKQQAKFQIEQADLSLFLEKEAQNINAFKAKLASTEQELKEQQ
TQLASLKDQTRTTLQGQEPEALEQLCHRLPQVCSQLEKQLDLSKLYLQQEARRQTLQQQL
THTLQDLHLQRTAHTQTATDLGQAQDKLKDLQQIVDLQRQIQQYEEARTQLQPEQPCPLC
GSTHHPFVEEHQPQTLTQAQQNLQQQQQRVQQLDQEERALVAAIQKLELAEKHLQEQVQE
TAAQTQTLSQQFTQLNSALNLAHEIAASATIDQSWNARKGELQQATASLQSLRGLRSRIE
AAHQTEQKLLSAQQGFRHEIEKTAEKRSYAQTQLQRLQAELEDLAEQEKVITGTLQSFFS
TYGLSYSGTNGPVLLAQLEQRKTAYEQKKAQLPDLREKYQQARSDAENGKKTLEEKQQEL
NQRQQQLTTAQTHLQELRAQRYKLLPEGLQPQIEKQRLQQALQQAAQALQSAEASFQREQ
EKLNLLQHQATVKHQEQQENQYTQSELETLLLQKIQPFGYTSLAQLQALLLSEDEARQLR
QQQEQLQKTVNELAHSLQQTLLEYASEKERHLTELTLEELQPLILALEEEKNQHLAQIAR
LEMQLQQDAALREKHQQLTQQLDLQKGEAERWDRLTRLIGSADGKKFSKYAQSLTLARLV
ELGNRHLLRLNDRYRILKSKEEELELQILDTYQGDAVRSVNSLSGGESFLVSLALALGLS
DLASHKAQIHSLFIDEGFGTLDAETLDIAMDALESLQASGKMIGIISHVEALKERISTQI
VVEKQAWGRSAIKVVSTAGMEV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatagcctccgttcgttttcttaaccttaattcgctgcagggcgaacaccacatc
aggttcaatgagccgcctttgagcgagtctggcctgtttgccattaccggccccacgggc
gcgggcaagactactatcttagatgccattacggtggccttgtacggacaggtgccgcgc
cacggacgcgacgtagccgagatcatgacccgccacaccggcgagtgttggtctgaggtg
gagtttgaggcccaggggaaattctaccgtgccaaatggattcttcggcgcagccgcggc
aaagccgatgggaaactgcagagcccggtcatggaactcatggacgcagacacccacgag
attctggagtcaaggctttcggagacccggcagcggatcatagacctgtgcggcctggac
tttcagcagttcctacggtcggtgatgctctcccaaggagattttacgcggttcctgaaa
gccagcgaaagcgagcgcagtgaactactggagaaactcaccgatacccgcatttactcc
cagatctccattgccgcctatgaaaaggccaaagcggagaaacagaaacttcaggacctg
gagcgcctgctgcagctggaccagcttctgcccgaggaagcccgcgccgccctggcccag
gaagtcactgacctgaaagccgcagcccgtttggccaatcagcaaattcagcagcacctg
caccagcagacctggctggaccacctgagcaagctaacccagaaagaaagcagcctgagt
gcccaactcacatcggcgcacaccgcccaacaggcctggcaaccacagcaggaaaaattg
cagcgccatgaacaggcccagccattccagagtgaactggcgcgtctggatcaggtgcag
cggcagggacaagccgtggcgcaagccgttacggccttacagcagcagatacctacgcag
gaaaagcaggtagcaaccaaccttcaaaccactaccgcagcccgcacggcccatgcgcag
gcccaacagacgctcacagaggcagagccgcgcctggaccaggtgctgcagcaagacacg
cacctggccgcccaacaagcccaatacaccaaagacgaacaagctacggcgcaactgcag
acccaggtaaggcagctggccgccgccctggaacagcagcaaactcagcagcaaaaactc
attaatgagggcaagcaactcaacgactggctgaaagaacatgcccaggacgaggaactg
gtacaaaccctgcacgacggcaaagccgaggttaaaaacctggaagaggttagaaaacag
caggccaagttccaaattgagcaagctgatttgagcctgtttttggaaaaagaggcccaa
aacataaacgcgtttaaagcaaaactggcatctacggaacaggaactgaaagagcagcaa
acccagctggcgtctttaaaggaccagacccgcaccaccctgcagggccaggagcccgag
gcgctggagcagctatgccaccgattgccgcaggtctgcagccagctggaaaagcaactg
gacctgagcaagctgtacctgcagcaggaagcccgccggcagaccctgcaacaacaactc
acccacaccctgcaggacctgcacctgcagcgcaccgcgcatacccaaaccgctacggat
ctgggccaggcccaggataagctcaaagacctgcagcagattgtagacctgcagcggcag
atacagcaatatgaagaggcgcgcacccaactgcagccagagcagccgtgcccgctctgc
ggctctactcatcacccctttgtagaagagcaccaaccgcagacccttacccaggcgcag
caaaacctgcaacagcagcaacaacgcgtgcaacaacttgaccaggaggaacgtgcgttg
gtagcggccatccagaaactggaactagccgaaaagcatttacaggagcaggtgcaggaa
accgcagcccagacccaaaccctgagccagcagttcacgcaacttaattcggcgctgaac
ctggcccatgagattgccgcctctgctaccattgaccaatcctggaatgcccgcaaaggc
gagctgcaacaggccacggcttctttgcaaagcttaagaggtctgcgctcccgcatagaa
gcggcccaccaaaccgagcagaagctgctttcagcgcagcagggttttaggcacgaaatt
gagaaaacagccgaaaaacgcagttatgcccaaacccagttacagcgcctgcaggctgag
ctggaagatctggcggaacaggagaaagtgatcacaggtacgctgcagtcatttttcagt
acctatggcctttcctattccggcaccaatgggcccgtgctgcttgcccagttggagcag
cgcaaaacagcgtatgagcaaaagaaggcccaactgcccgacctgcgcgagaaataccag
caggctagatctgacgcggagaatggcaagaaaaccctggaggaaaaacaacaggaactc
aatcagcgccagcaacaactgaccactgcccaaacccacctgcaggaactcagggcccaa
cgctataaactccttcctgaaggcctgcaaccgcagatagagaaacagcggttgcaacaa
gcgttgcagcaggccgcccaggcgctgcaatctgccgaggcgtccttccaacgggagcag
gaaaaactcaaccttctgcagcaccaggcaaccgtcaagcaccaggagcagcaggagaac
caatacacccaaagcgagttagagactttgcttttgcagaagattcaaccctttggctat
acatccctggcccagctacaggccctgcttttatcagaagatgaggcgcgccaactgcgc
cagcaacaggagcagctgcagaagactgtcaatgagctggcgcatagcctgcagcagacg
ctgctagagtacgcctcagaaaaagagcgtcacctcacggagctgaccctggaagagttg
caaccgctcattctggcgctggaagaagagaaaaaccagcacctggcccagattgcccgc
ctggaaatgcaattgcagcaagacgccgccctgcgcgaaaagcaccagcaactcacccag
caattagacctgcagaaaggcgaggccgagcgttgggaccgccttactcgcctcatcggc
tccgccgacggcaagaagttcagcaagtacgcgcaaagcctaacgctggcccggctggta
gaactgggcaaccgccatttgcttcggctcaatgaccgctaccgcattttaaaaagcaag
gaagaggaactggaactgcagatcctggacacgtaccaaggcgatgccgtccggtctgtg
aactcgctttccggcggcgaaagctttttggtgagcctggcactggccttaggcctctct
gatctagccagccacaaagcccagattcattcgctgtttattgatgagggcttcgggacc
ctggatgcggagaccctggatattgccatggatgctctggagagcctgcaggccagcggc
aagatgataggcattatctcccacgtagaagccttaaaagaacgcatcagtacgcagatt
gtggtagagaaacaggcctggggccgaagtgccattaaagtggtaagcaccgcaggaatg
gaggtgtag
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integrated database retrieval system