Rufibacter radiotolerans: TH63_08380
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Entry
TH63_08380 CDS
T03996
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ruf
Rufibacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruf03400
]
TH63_08380
Enzymes [BR:
ruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TH63_08380
DNA repair and recombination proteins [BR:
ruf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TH63_08380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
AKQ45665
UniProt:
A0A0H4VIP4
LinkDB
All DBs
Position
2003939..2006854
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AA seq
971 aa
AA seq
DB search
MQSFLRQAADHIYQAYTDQLSDLCIVLPTRRATLYFKNALAEAAPTGIWSPQIYSMEEFV
CNMANVEVLEPLHLQLDLYDIMLRFDPKLDFDQFVGWSSTLLEDFSRMDMELVDPAAVFD
YVSEAKALERWDPGKPGSSTPTENVKQYFQLWTNLERTYHALRQKLQKDKQAYTGMAFRM
VADRIKDIAKSEKGCFRYVFIGLNALSRAEQHIIQTLLSAGKAEVFFDSDDFYMNLESDK
RAGHFLKRYKAKWPLPEWNWQQNLLLTDTKEINAIGVANASMQGKIAGQLLREIREKDPA
AEIAIVLPDETLLLPVLHSISDEVSDYNVTMGLSFKGTPLFNLIDLLFEVHLTGVVQPTD
SGFRINRYHHLAVTKLLQHPFLRRYEQYLNSVAERETDLDLFQHVLDEMVQRNSVLLTAE
EIIKLGREHPMFITLFRTWNDCTDLIDTLYQLVDALGRIYRVETENPIETEYLYILYTIV
KRLDTLFDCREHKISVRSFKKFLYEQIGNTKLPFSGEPISPTQVMGMLETRALDFENLII
LSVNENVLPQPKKQNSLFPYDVLRTFGLPTYAEQESITSYYFYRLLQRAKRVNLLYVLPS
DTYGSGEKSRFILQLQHDLAPRNPNITFRELTAVVEHLDTKEYEPDIIIQKDEEVLSKMK
NELRRGLYPSHLNQFVNCSLQYYFSRIAKLQEVEEIDELVGADTFGTIVHQVLEDYFRPF
AEEARPIEKADVDGMLAGLPDKVQQEFKRGTLGNLPEQGMNLILYKVAVQLLTRYLQGLQ
TSEELPLYILSLEDTLQTELEVTLPSGEKVPVQISGKADRIDLSGRTLRVIDYKTGKVLA
PSLKVKPEDLEATLLHDRHLDKVRQLWLYRYILAKEIQKGSLLESKVLNLPKAQYEYEAG
IISFRNLGAGVLTSELPFVDAAGEPADFMQTTERLLKDLVVRMLDPAEPIRKTNDLETCQ
YCAYKSICARG
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctttcctgcggcaagccgctgaccatatttaccaggcctacacagaccagctc
agtgacctgtgcattgtattgcctacccggcgggctacgctttattttaagaatgccttg
gcggaggccgcgcctaccggcatctggtcgccgcagatttactccatggaggagtttgtc
tgcaacatggccaatgtagaagtattggagcctctgcacctgcagctggatttgtatgac
atcatgctgcgctttgaccccaagctggactttgaccaatttgtgggttggtcctctacc
ctgctggaagatttctcacgcatggacatggagctggtagaccccgccgcggtgtttgac
tacgtgagcgaagccaaggccctggaacgctgggacccgggtaaaccaggtagcagcacg
cccacagaaaacgtgaagcaatatttccagctctggaccaacctggaacgcacctaccat
gccctgcgccagaaactgcagaaagacaagcaggcctacactggcatggccttccggatg
gtggccgaccggatcaaggacattgccaaaagcgagaaaggctgttttaggtacgtgttc
attggcttgaatgccctttcccgcgccgagcagcacatcattcagaccttattgtctgcc
ggcaaagccgaggttttcttcgactcagatgacttttacatgaatctggagtcagataaa
cgggcggggcatttcctgaagcgttacaaagccaaatggcccctgcccgagtggaactgg
caacagaacctgctccttaccgataccaaggaaattaacgccattggggtggccaatgcc
agcatgcaaggcaagattgctgggcagttgctccgcgagatccgggaaaaagaccccgcc
gccgagattgccatcgtgctaccggatgagaccttgctcttgccggtgcttcactccatc
tcagacgaggtctctgattacaacgtgaccatgggcctgtcattcaagggtacgcccctg
ttcaacctcattgatctgctttttgaggtgcatcttacgggcgtggtacaacccactgac
tccggcttccggattaaccgctaccaccacctggcggtcaccaagctgctgcagcaccca
ttcttgcgccgctatgagcaatacctcaacagcgtggctgagcgcgagaccgaccttgat
ctgttccaacacgtgctggacgagatggtacaacggaacagcgtgctcctcaccgccgaa
gaaattattaagctgggtcgcgagcaccccatgttcattaccctttttagaacctggaac
gactgcaccgacctgattgacacgctctaccaactggtggacgccctgggccgcatttac
cgggtggaaactgagaaccccattgaaaccgagtacctctacattctttacaccattgtc
aagcgcctggacacgctctttgattgccgcgagcataagatctcggtgcgcagtttcaag
aaattcctgtatgagcagataggcaacaccaagctccctttcagcggggaacccatctcg
cctacccaagtcatggggatgctggagacccgcgccctggactttgagaacctcattatc
ctgagcgtaaacgagaatgtgctcccccagcctaagaagcagaactcgctttttccgtat
gacgtgttgcgcaccttcgggctgcctacttatgctgaacaagagagcattacctcttac
tacttctaccggttgttgcagcgggccaagcgcgtgaacctgctgtacgtgctgccttca
gatacctatggttctggggagaaatcaagattcatcctgcagttgcagcatgatctggcg
ccccgcaaccccaacatcactttccgggaattaacggcggtagtagagcatttggacacc
aaagaatacgagccggacatcatcattcagaaagatgaagaggtgctcagcaagatgaaa
aacgagctgcggcgcggcctctacccttcccatctgaaccagtttgtcaactgctccttg
cagtattatttcagccggattgccaagctacaggaagtggaggagattgatgaactggtg
ggcgctgataccttcgggacgattgtgcaccaggtgctggaagactatttcaggccgttt
gccgaagaggcccgccctattgagaaagccgatgtagacgggatgctggccggattaccg
gacaaagtgcagcaggaattcaagcgcggtaccctggggaacctgccggagcagggcatg
aacctgattctctacaaggtggccgtgcaactgctcacccgctacctgcaagggctccaa
acttcggaagaactgccgctctacattctttccctggaagacaccctgcagaccgaattg
gaagtaaccttgccttccggcgaaaaggtgcccgtgcagatctcaggcaaagccgaccgc
attgacctgagtggccgcaccctgcgcgtgattgactacaaaaccggcaaagtgctggcc
cctagcctaaaagtaaaacccgaagacctggaagccaccctgctgcacgaccgacacctg
gacaaagtgcggcagctttggctgtaccgctatattctagccaaagagatccagaaaggc
agccttctggaaagcaaagtcctgaacttacccaaagcgcagtatgaatacgaagccggc
attatctcctttaggaacctgggcgctggggtgctcacctctgagcttccgtttgtagat
gccgccggagaacccgcggacttcatgcaaactacggagcgtcttcttaaagacttggtg
gtccgaatgctggaccccgcagaacctataagaaaaaccaacgacctggaaacctgccaa
tactgcgcctacaaaagtatctgcgccagaggttag
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